FCSK — 671 ClinVar variants

All ClinVar germline FCSK variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 370 flagged for review →

1 Pathogenic/Likely pathogenic · 6 Likely pathogenic · 22 Conflicting · 28 Benign · 13 Benign/Likely benign · 195 Likely benign · 406 Uncertain significance

Full FCSK gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 370

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors lean, ClinVar uncertain 273

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 273

Predictors split 83

The independent predictors disagree with each other — read with care.

All FCSK variants

Pathogenic/Likely pathogenic 1

  • p.Glu335fs Multiple submitters congenital disorder of glycosylation with defective fucosylation 2

Likely pathogenic 6

  • c.412-2A>G Multiple submitters congenital disorder of glycosylation with defective fucosylation 2
  • c.956-1G>A Single submitter congenital disorder of glycosylation with defective fucosylation 2
  • p.Cys399Ter Single submitter congenital disorder of glycosylation with defective fucosylation 2
  • p.Pro180fs Single submitter congenital disorder of glycosylation with defective fucosylation 2
  • p.Pro287fs Single submitter congenital disorder of glycosylation with defective fucosylation 2
  • p.Ter1085Trp Single submitter congenital disorder of glycosylation with defective fucosylation 2

Conflicting classifications of pathogenicity 22

Benign 28

Benign/Likely benign 13

Likely benign 195

Uncertain significance 406

Showing the top 300 by review status; the full set is in the sitemap.