FTCD — 413 ClinVar variants

All ClinVar germline FTCD variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 178 flagged for review →

4 Pathogenic · 6 Pathogenic/Likely pathogenic · 26 Likely pathogenic · 10 Conflicting · 26 Benign · 13 Benign/Likely benign · 135 Likely benign · 193 Uncertain significance

Full FTCD gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 178

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 5

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 112

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 61

The independent predictors disagree with each other — read with care.

All FTCD variants

Pathogenic 4

  • p.Arg255Ter Multiple submitters Inborn genetic diseases
  • p.Glu205fs Single submitter formiminoglutamic aciduria
  • p.Ser165fs Single submitter formiminoglutamic aciduria
  • p.Tyr126Ter Single submitter formiminoglutamic aciduria

Pathogenic/Likely pathogenic 6

  • p.Arg71Ter Multiple submitters FTCD-related disorder
  • p.Leu536Ter Multiple submitters formiminoglutamic aciduria
  • p.Pro331fs Multiple submitters FTCD-related disorders
  • p.Tyr124Ter Multiple submitters formiminoglutamic aciduria
  • p.Val344fs Multiple submitters formiminoglutamic aciduria
  • p.Val99fs Multiple submitters formiminoglutamic aciduria

Likely pathogenic 26

  • p.Ala62fs Multiple submitters formiminoglutamic aciduria
  • c.1068_1098+24del Single submitter formiminoglutamic aciduria
  • c.1261-1G>A Single submitter formiminoglutamic aciduria
  • c.1304+1G>A Single submitter formiminoglutamic aciduria
  • c.1443+1del Single submitter formiminoglutamic aciduria
  • c.1444-1G>A Single submitter formiminoglutamic aciduria
  • c.1444-2A>C Single submitter formiminoglutamic aciduria
  • c.54+2T>A Single submitter formiminoglutamic aciduria
  • p.Ala361fs Single submitter formiminoglutamic aciduria
  • p.Ala362fs Single submitter formiminoglutamic aciduria
  • p.Arg333fs Single submitter formiminoglutamic aciduria
  • p.Arg333Ter Single submitter FTCD-related disorder
  • p.Arg341fs Single submitter formiminoglutamic aciduria
  • p.Arg435fs Single submitter formiminoglutamic aciduria
  • p.Cys313Ter Single submitter formiminoglutamic aciduria
  • p.Gln154Ter Single submitter formiminoglutamic aciduria
  • p.Glu332fs Single submitter formiminoglutamic aciduria
  • p.Glu431fs Single submitter formiminoglutamic aciduria
  • p.Glu508Ter Single submitter formiminoglutamic aciduria
  • p.Gly355fs Single submitter formiminoglutamic aciduria
  • p.His515fs Single submitter formiminoglutamic aciduria
  • p.Leu340fs Single submitter formiminoglutamic aciduria
  • p.Phe111fs Single submitter formiminoglutamic aciduria
  • p.Ser100fs Single submitter formiminoglutamic aciduria
  • p.Ser358fs Single submitter formiminoglutamic aciduria
  • p.Tyr225fs Single submitter formiminoglutamic aciduria

Conflicting classifications of pathogenicity 10

Benign 26

  • c.54+12G>A Multiple submitters formiminoglutamic aciduria
  • c.906+15C>T Multiple submitters formiminoglutamic aciduria
  • c.*108G>A Multiple submitters formiminoglutamic aciduria
  • p.Ala438Val Multiple submitters formiminoglutamic aciduria
  • p.Ala464= Multiple submitters formiminoglutamic aciduria
  • p.Arg350= Multiple submitters formiminoglutamic aciduria
  • p.Gly490= Multiple submitters formiminoglutamic aciduria
  • p.Leu307= Multiple submitters formiminoglutamic aciduria
  • p.Lys151Met Multiple submitters formiminoglutamic aciduria
  • p.Pro139= Multiple submitters formiminoglutamic aciduria
  • p.Val101Met Multiple submitters formiminoglutamic aciduria
  • c.1261-13C>G Single submitter formiminoglutamic aciduria
  • c.1443+17del Single submitter formiminoglutamic aciduria
  • c.1443+4dup Single submitter formiminoglutamic aciduria
  • c.1443+9del Single submitter formiminoglutamic aciduria
  • c.367+16del Single submitter formiminoglutamic aciduria
  • c.367+16dup Single submitter formiminoglutamic aciduria
  • c.368-17G>T Single submitter formiminoglutamic aciduria
  • c.457-14G>A Single submitter formiminoglutamic aciduria
  • c.457-16G>A Single submitter formiminoglutamic aciduria
  • c.*19C>T Single submitter
  • p.Ala159= Single submitter formiminoglutamic aciduria
  • p.Arg446Gln Single submitter formiminoglutamic aciduria
  • p.Glu128Lys Single submitter formiminoglutamic aciduria
  • p.Ser12= Single submitter formiminoglutamic aciduria
  • p.Thr429= Single submitter formiminoglutamic aciduria

Benign/Likely benign 13

  • c.1099-20dup Multiple submitters formiminoglutamic aciduria
  • c.239-13C>T Multiple submitters formiminoglutamic aciduria
  • c.239-16C>T Multiple submitters formiminoglutamic aciduria
  • c.368-15C>T Multiple submitters formiminoglutamic aciduria
  • c.368-17G>A Multiple submitters formiminoglutamic aciduria
  • c.456+10C>G Multiple submitters formiminoglutamic aciduria
  • p.Arg136Gln Multiple submitters Inborn genetic diseases
  • p.Asn64= Multiple submitters formiminoglutamic aciduria
  • p.Asp89= Multiple submitters formiminoglutamic aciduria
  • p.Gly32Cys Multiple submitters formiminoglutamic aciduria ⚠
  • p.Thr390Ala Multiple submitters formiminoglutamic aciduria
  • p.Thr407Lys Multiple submitters formiminoglutamic aciduria
  • p.Tyr126= Multiple submitters formiminoglutamic aciduria

Likely benign 135

  • c.774+18C>T Multiple submitters formiminoglutamic aciduria
  • p.Ala143= Multiple submitters formiminoglutamic aciduria
  • p.Ala439= Multiple submitters formiminoglutamic aciduria
  • p.Arg470Gln Multiple submitters formiminoglutamic aciduria
  • p.Asp120= Multiple submitters
  • p.Asp39= Multiple submitters formiminoglutamic aciduria
  • p.Glu400Lys Multiple submitters Inborn genetic diseases ⚠
  • p.Ile199= Multiple submitters formiminoglutamic aciduria
  • p.Ile94= Multiple submitters formiminoglutamic aciduria
  • p.Leu425= Multiple submitters formiminoglutamic aciduria
  • p.Leu461= Multiple submitters formiminoglutamic aciduria
  • p.Pro95= Multiple submitters Inborn genetic diseases
  • p.Tyr146= Multiple submitters formiminoglutamic aciduria
  • p.Val374= Multiple submitters formiminoglutamic aciduria
  • c.1098+13G>A Single submitter formiminoglutamic aciduria
  • c.1098+15A>G Single submitter
  • c.1098+18_1098+19insGGGCGCTGTTGGGGGGAGGGCGGGGAG Single submitter formiminoglutamic aciduria
  • c.1098+20C>A Single submitter formiminoglutamic aciduria
  • c.1098+20C>G Single submitter formiminoglutamic aciduria
  • c.1260+9C>T Single submitter formiminoglutamic aciduria
  • c.1261-18T>A Single submitter formiminoglutamic aciduria
  • c.1261-19T>G Single submitter formiminoglutamic aciduria
  • c.1261-8T>C Single submitter formiminoglutamic aciduria
  • c.1304+14G>A Single submitter formiminoglutamic aciduria
  • c.1304+16C>T Single submitter formiminoglutamic aciduria
  • c.1304+20C>T Single submitter formiminoglutamic aciduria
  • c.1305-15T>C Single submitter formiminoglutamic aciduria
  • c.1305-16C>T Single submitter
  • c.1305-17C>T Single submitter formiminoglutamic aciduria
  • c.1443+12C>T Single submitter formiminoglutamic aciduria
  • c.1444-19C>G Single submitter formiminoglutamic aciduria
  • c.1539+16G>T Single submitter formiminoglutamic aciduria
  • c.1539+7A>T Single submitter formiminoglutamic aciduria
  • c.1540-17_1540-16del Single submitter formiminoglutamic aciduria
  • c.1540-6C>T Single submitter formiminoglutamic aciduria
  • c.238+13G>A Single submitter formiminoglutamic aciduria
  • c.239-12G>A Single submitter formiminoglutamic aciduria
  • c.367+11C>T Single submitter formiminoglutamic aciduria
  • c.367+13C>T Single submitter formiminoglutamic aciduria
  • c.367+16C>T Single submitter formiminoglutamic aciduria
  • c.367+17del Single submitter formiminoglutamic aciduria
  • c.367+17G>A Single submitter formiminoglutamic aciduria
  • c.367+18C>G Single submitter formiminoglutamic aciduria
  • c.368-14G>A Single submitter formiminoglutamic aciduria
  • c.456+13C>T Single submitter formiminoglutamic aciduria
  • c.456+14G>A Single submitter formiminoglutamic aciduria
  • c.456+16G>C Single submitter formiminoglutamic aciduria
  • c.456+17C>T Single submitter formiminoglutamic aciduria
  • c.54+10G>A Single submitter formiminoglutamic aciduria
  • c.54+14A>T Single submitter formiminoglutamic aciduria
  • c.54+9C>T Single submitter formiminoglutamic aciduria
  • c.55-14G>T Single submitter formiminoglutamic aciduria
  • c.55-16C>T Single submitter formiminoglutamic aciduria
  • c.55-18G>A Single submitter formiminoglutamic aciduria
  • c.636+8C>T Single submitter formiminoglutamic aciduria
  • c.636+9G>A Single submitter formiminoglutamic aciduria
  • c.637-14C>T Single submitter formiminoglutamic aciduria
  • c.774+11G>A Single submitter formiminoglutamic aciduria
  • c.774+19G>A Single submitter formiminoglutamic aciduria
  • c.774+7C>G Single submitter formiminoglutamic aciduria
  • c.774+9G>A Single submitter formiminoglutamic aciduria
  • c.775-16G>A Single submitter formiminoglutamic aciduria
  • c.775-20C>T Single submitter formiminoglutamic aciduria
  • c.906+13G>A Single submitter formiminoglutamic aciduria
  • c.906+7C>T Single submitter formiminoglutamic aciduria
  • c.906+8G>A Single submitter formiminoglutamic aciduria
  • c.969-15_969-14delinsTT Single submitter formiminoglutamic aciduria
  • c.*28G>A Single submitter
  • c.*71C>T Single submitter
  • p.Ala178= Single submitter formiminoglutamic aciduria
  • p.Ala200= Single submitter formiminoglutamic aciduria
  • p.Ala438= Single submitter formiminoglutamic aciduria
  • p.Ala483= Single submitter formiminoglutamic aciduria
  • p.Ala486= Single submitter formiminoglutamic aciduria
  • p.Ala494= Single submitter formiminoglutamic aciduria
  • p.Ala530= Single submitter formiminoglutamic aciduria
  • p.Ala66= Single submitter formiminoglutamic aciduria
  • p.Arg208= Single submitter formiminoglutamic aciduria
  • p.Arg329= Single submitter formiminoglutamic aciduria
  • p.Arg333= Single submitter formiminoglutamic aciduria
  • p.Arg341= Single submitter formiminoglutamic aciduria
  • p.Arg46= Single submitter formiminoglutamic aciduria
  • p.Asp157= Single submitter formiminoglutamic aciduria
  • p.Asp157Tyr Single submitter formiminoglutamic aciduria ⚠
  • p.Asp157Val Single submitter Inborn genetic diseases
  • p.Asp21= Single submitter formiminoglutamic aciduria
  • p.Asp434= Single submitter formiminoglutamic aciduria
  • p.Cys107= Single submitter formiminoglutamic aciduria
  • p.Cys57= Single submitter formiminoglutamic aciduria
  • p.Glu81= Single submitter formiminoglutamic aciduria
  • p.Gly334= Single submitter formiminoglutamic aciduria
  • p.Gly336Val Single submitter formiminoglutamic aciduria
  • p.Gly375= Single submitter formiminoglutamic aciduria
  • p.Gly98= Single submitter formiminoglutamic aciduria
  • p.His515= Single submitter formiminoglutamic aciduria
  • p.Ile141= Single submitter formiminoglutamic aciduria
  • p.Ile20= Single submitter formiminoglutamic aciduria
  • p.Ile322= Single submitter
  • p.Ile500= Single submitter formiminoglutamic aciduria
  • p.Ile73= Single submitter formiminoglutamic aciduria
  • p.Leu279= Single submitter
  • p.Leu387= Single submitter formiminoglutamic aciduria
  • p.Leu4= Single submitter
  • p.Leu499= Single submitter formiminoglutamic aciduria
  • p.Leu521= Single submitter formiminoglutamic aciduria
  • p.Leu536= Single submitter formiminoglutamic aciduria
  • p.Lys218= Single submitter formiminoglutamic aciduria
  • p.Phe343= Single submitter formiminoglutamic aciduria
  • p.Phe398= Single submitter formiminoglutamic aciduria
  • p.Pro160= Single submitter formiminoglutamic aciduria
  • p.Pro274= Single submitter formiminoglutamic aciduria
  • p.Pro31= Single submitter
  • p.Pro451= Single submitter formiminoglutamic aciduria
  • p.Pro463= Single submitter formiminoglutamic aciduria
  • p.Pro55= Single submitter formiminoglutamic aciduria
  • p.Pro83= Single submitter formiminoglutamic aciduria
  • p.Ser165= Single submitter formiminoglutamic aciduria
  • p.Ser351= Single submitter formiminoglutamic aciduria
  • p.Ser402= Single submitter formiminoglutamic aciduria
  • p.Ser43= Single submitter formiminoglutamic aciduria
  • p.Ser460= Single submitter formiminoglutamic aciduria
  • p.Thr176= Single submitter formiminoglutamic aciduria
  • p.Thr437= Single submitter
  • p.Thr457= Single submitter formiminoglutamic aciduria
  • p.Thr47= Single submitter formiminoglutamic aciduria
  • p.Thr538= Single submitter formiminoglutamic aciduria
  • p.Tyr250= Single submitter formiminoglutamic aciduria
  • p.Val121= Single submitter formiminoglutamic aciduria
  • p.Val265= Single submitter
  • p.Val344= Single submitter formiminoglutamic aciduria
  • c.367+10C>G No assertion criteria FTCD-related disorder
  • c.*80C>G No assertion criteria FTCD-related disorder
  • p.Phe51= No assertion criteria FTCD-related disorder
  • p.Thr244= No assertion criteria FTCD-related disorder
  • p.Thr564Lys No assertion criteria FTCD-related disorder

Uncertain significance 193