GHSR — 298 ClinVar variants

All ClinVar germline GHSR variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 143 flagged for review →

1 Pathogenic · 1 Likely pathogenic · 11 Conflicting · 18 Benign · 5 Benign/Likely benign · 67 Likely benign · 195 Uncertain significance

Full GHSR gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 143

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 6

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 100

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 37

The independent predictors disagree with each other — read with care.

All GHSR variants

Pathogenic 1

  • p.Trp2Ter No assertion criteria short stature due to GHSR deficiency

Likely pathogenic 1

Conflicting classifications of pathogenicity 11

  • p.Ala204Glu Single submitter short stature due to GHSR deficiency ⚠
  • p.Ala23Val Single submitter short stature due to GHSR deficiency ⚠
  • p.Ala358Thr Single submitter short stature due to GHSR deficiency ⚠
  • p.Arg357Gln Single submitter short stature due to GHSR deficiency ⚠
  • p.Cys275Arg Single submitter Inborn genetic diseases ⚠
  • p.Gly339= Single submitter short stature due to GHSR deficiency
  • p.Leu34= Single submitter short stature due to GHSR deficiency
  • p.Phe147Tyr Single submitter Inborn genetic diseases ⚠
  • p.Ser308= Single submitter short stature due to GHSR deficiency
  • p.Thr77= Single submitter short stature due to GHSR deficiency
  • p.Val182Ala Single submitter short stature due to GHSR deficiency

Benign 18

  • c.*114A>G Multiple submitters short stature due to GHSR deficiency
  • c.*122C>T Multiple submitters short stature due to GHSR deficiency
  • p.Ala48= Multiple submitters short stature due to GHSR deficiency
  • p.Arg159= Multiple submitters short stature due to GHSR deficiency
  • p.Asp20= Multiple submitters short stature due to GHSR deficiency
  • p.Gly57= Multiple submitters short stature due to GHSR deficiency
  • c.796+219TC[5] Single submitter
  • c.796+245T>C Single submitter
  • c.797-194C>T Single submitter
  • c.*1024G>C Single submitter short stature due to GHSR deficiency
  • c.*1109G>T Single submitter short stature due to GHSR deficiency
  • c.*1308T>G Single submitter short stature due to GHSR deficiency
  • c.*1736A>G Single submitter short stature due to GHSR deficiency
  • c.*792G>C Single submitter short stature due to GHSR deficiency
  • c.*796A>T Single submitter short stature due to GHSR deficiency
  • c.*834C>A Single submitter short stature due to GHSR deficiency
  • p.Ser29= Single submitter
  • p.Thr127= Single submitter

Benign/Likely benign 5

  • p.Ala144= Multiple submitters
  • p.Arg70= Multiple submitters short stature due to GHSR deficiency
  • p.Leu118= Multiple submitters short stature due to GHSR deficiency
  • p.Leu91Phe Multiple submitters short stature due to GHSR deficiency
  • p.Pro177= Multiple submitters short stature due to GHSR deficiency

Likely benign 67

Uncertain significance 195