GIGYF2 — 266 ClinVar variants

All ClinVar germline GIGYF2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 140 flagged for review →

1 Pathogenic · 2 Conflicting · 45 Benign · 5 Benign/Likely benign · 50 Likely benign · 163 Uncertain significance

Full GIGYF2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 140

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 2

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 103

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 35

The independent predictors disagree with each other — read with care.

All GIGYF2 variants

Pathogenic 1

  • p.Arg260Ter Single submitter GIGYF2-associated neurodevelopmental disorder

Conflicting classifications of pathogenicity 2

  • p.Ala793Val Single submitter Parkinson disease 11, autosomal dominant, susceptibility to ⚠
  • p.Thr188Ala Single submitter GIGYF2-related disorder ⚠

Benign 45

Benign/Likely benign 5

Likely benign 50

Uncertain significance 163