GLRA1 — 556 ClinVar variants

All ClinVar germline GLRA1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 227 flagged for review →

41 Pathogenic · 10 Pathogenic/Likely pathogenic · 28 Likely pathogenic · 27 Conflicting · 25 Benign · 14 Benign/Likely benign · 165 Likely benign · 246 Uncertain significance

Full GLRA1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 227

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors lean, ClinVar uncertain 166

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 166

Predictors split 46

The independent predictors disagree with each other — read with care.

All GLRA1 variants

Pathogenic 41

Pathogenic/Likely pathogenic 10

  • c.1059+1G>A Multiple submitters hereditary hyperekplexia
  • p.Arg100fs Multiple submitters hereditary hyperekplexia
  • p.Arg246Trp Multiple submitters hereditary hyperekplexia
  • p.Arg280His Multiple submitters hereditary hyperekplexia
  • p.Arg299Leu Multiple submitters hereditary hyperekplexia
  • p.Arg420His Multiple submitters hereditary hyperekplexia
  • p.Arg93Trp Multiple submitters hereditary hyperekplexia
  • p.His135fs Multiple submitters hereditary hyperekplexia
  • p.Pro63fs Multiple submitters hereditary hyperekplexia
  • p.Thr190Met Multiple submitters hyperekplexia 1

Likely pathogenic 28

Conflicting classifications of pathogenicity 27

Benign 25

Benign/Likely benign 14

  • c.57-12C>T Multiple submitters hereditary hyperekplexia
  • p.Ala331= Multiple submitters hereditary hyperekplexia
  • p.Arg241= Multiple submitters hereditary hyperekplexia
  • p.Arg344= Multiple submitters hyperekplexia 1
  • p.Arg347= Multiple submitters hereditary hyperekplexia
  • p.Arg349Gln Multiple submitters hereditary hyperekplexia
  • p.Arg405Gln Multiple submitters hereditary hyperekplexia
  • p.Arg8Pro Multiple submitters hyperekplexia 1
  • p.Asn130= Multiple submitters hereditary hyperekplexia
  • p.Asp108= Multiple submitters hyperekplexia 1
  • p.Gly370Ser Multiple submitters hereditary hyperekplexia
  • p.His447= Multiple submitters hereditary hyperekplexia
  • p.Pro174= Multiple submitters hereditary hyperekplexia
  • p.Ser39= Multiple submitters hereditary hyperekplexia

Likely benign 165

  • c.1059+252C>T Multiple submitters
  • c.185-9G>A Multiple submitters hereditary hyperekplexia
  • c.477-13C>T Multiple submitters hereditary hyperekplexia
  • c.698-9T>C Multiple submitters hereditary hyperekplexia
  • c.913-14C>A Multiple submitters hereditary hyperekplexia
  • c.-164C>T Multiple submitters hyperekplexia 1
  • p.Asn66= Multiple submitters hereditary hyperekplexia
  • p.Ile195= Multiple submitters hereditary hyperekplexia
  • c.1059+12G>T Single submitter hereditary hyperekplexia
  • c.1059+14T>C Single submitter hereditary hyperekplexia
  • c.1059+15_1059+18dup Single submitter hereditary hyperekplexia
  • c.1059+18T>G Single submitter hereditary hyperekplexia
  • c.1059+19G>A Single submitter hereditary hyperekplexia
  • c.1059+7C>A Single submitter hereditary hyperekplexia
  • c.1059+8T>G Single submitter hereditary hyperekplexia
  • c.1060-10T>A Single submitter hereditary hyperekplexia
  • c.1060-20C>T Single submitter hereditary hyperekplexia
  • c.1060-40G>A Single submitter
  • c.1060-4C>A Single submitter hereditary hyperekplexia
  • c.1060-7A>C Single submitter hereditary hyperekplexia
  • c.184+11T>G Single submitter hereditary hyperekplexia
  • c.184+12A>T Single submitter hereditary hyperekplexia
  • c.184+14T>G Single submitter hereditary hyperekplexia
  • c.184+19C>A Single submitter hereditary hyperekplexia
  • c.184+9A>G Single submitter hereditary hyperekplexia
  • c.185-15T>C Single submitter hereditary hyperekplexia
  • c.185-7T>C Single submitter hereditary hyperekplexia
  • c.185-96C>T Single submitter
  • c.252+125_252+138del Single submitter
  • c.252+17A>G Single submitter hereditary hyperekplexia
  • c.252+19A>G Single submitter hereditary hyperekplexia
  • c.253-18_253-16del Single submitter hereditary hyperekplexia
  • c.253-6C>T Single submitter hereditary hyperekplexia
  • c.253-7G>A Single submitter hereditary hyperekplexia
  • c.253-8G>C Single submitter hereditary hyperekplexia
  • c.253-9T>C Single submitter hereditary hyperekplexia
  • c.476+10G>C Single submitter hereditary hyperekplexia
  • c.476+20A>G Single submitter hereditary hyperekplexia
  • c.476+8C>T Single submitter hereditary hyperekplexia
  • c.477-14C>T Single submitter hereditary hyperekplexia
  • c.477-15C>T Single submitter hereditary hyperekplexia
  • c.559+11T>C Single submitter hereditary hyperekplexia
  • c.559+12G>A Single submitter hereditary hyperekplexia
  • c.559+15T>A Single submitter hereditary hyperekplexia
  • c.559+16G>C Single submitter hereditary hyperekplexia
  • c.559+18G>C Single submitter hereditary hyperekplexia
  • c.559+19T>C Single submitter hereditary hyperekplexia
  • c.56+19A>C Single submitter hereditary hyperekplexia
  • c.560-15C>T Single submitter hereditary hyperekplexia
  • c.560-16T>C Single submitter hereditary hyperekplexia
  • c.560-4C>G Single submitter hereditary hyperekplexia
  • c.560-8C>T Single submitter hereditary hyperekplexia
  • c.560-9C>G Single submitter hereditary hyperekplexia
  • c.560-9C>T Single submitter hereditary hyperekplexia
  • c.57-14C>G Single submitter hereditary hyperekplexia
  • c.57-15T>C Single submitter hereditary hyperekplexia
  • c.57-16CT[2] Single submitter hereditary hyperekplexia
  • c.57-176T>C Single submitter
  • c.57-257G>C Single submitter
  • c.57-304C>T Single submitter
  • c.697+17C>T Single submitter hereditary hyperekplexia
  • c.697+310G>A Single submitter
  • c.697+8C>A Single submitter hereditary hyperekplexia
  • c.912+10A>T Single submitter hereditary hyperekplexia
  • c.912+11_912+12insCTC Single submitter hereditary hyperekplexia
  • c.912+11T>C Single submitter hereditary hyperekplexia
  • c.912+12T>C Single submitter hereditary hyperekplexia
  • c.912+18A>G Single submitter hereditary hyperekplexia
  • c.912+7C>T Single submitter hereditary hyperekplexia
  • c.912+8_912+9insTGCCGGCTCTCGAG Single submitter hereditary hyperekplexia
  • c.913-12C>A Single submitter hereditary hyperekplexia
  • c.913-16del Single submitter hereditary hyperekplexia
  • c.913-19T>G Single submitter hereditary hyperekplexia
  • c.913-5T>C Single submitter hereditary hyperekplexia
  • c.913-6dup Single submitter hereditary hyperekplexia
  • c.913-8C>A Single submitter hereditary hyperekplexia
  • c.913-8C>T Single submitter hereditary hyperekplexia
  • p.Ala102= Single submitter hereditary hyperekplexia
  • p.Ala203= Single submitter hereditary hyperekplexia
  • p.Ala207= Single submitter hereditary hyperekplexia
  • p.Ala240= Single submitter hereditary hyperekplexia
  • p.Ala330= Single submitter hereditary hyperekplexia
  • p.Ala385Thr Single submitter hereditary hyperekplexia
  • p.Ala54= Single submitter hereditary hyperekplexia
  • p.Arg100= Single submitter hereditary hyperekplexia
  • p.Arg349= Single submitter hereditary hyperekplexia
  • p.Arg442= Single submitter hereditary hyperekplexia
  • p.Arg93= Single submitter hereditary hyperekplexia
  • p.Asn104= Single submitter
  • p.Asn143= Single submitter hereditary hyperekplexia
  • p.Asn153= Single submitter hereditary hyperekplexia
  • p.Asn273= Single submitter
  • p.Asn392= Single submitter hereditary hyperekplexia
  • p.Asn431= Single submitter hereditary hyperekplexia
  • p.Asn97= Single submitter hereditary hyperekplexia
  • p.Asp208= Single submitter hereditary hyperekplexia
  • p.Asp222= Single submitter hereditary hyperekplexia
  • p.Asp312= Single submitter hereditary hyperekplexia
  • p.Asp378= Single submitter hereditary hyperekplexia
  • p.Asp445= Single submitter hereditary hyperekplexia
  • p.Glu13= Single submitter hereditary hyperekplexia
  • p.Glu219= Single submitter hereditary hyperekplexia
  • p.Glu341= Single submitter hereditary hyperekplexia
  • p.Glu341Gly Single submitter hereditary hyperekplexia
  • p.Gly188= Single submitter hereditary hyperekplexia
  • p.Gly209= Single submitter hereditary hyperekplexia
  • p.Gly233= Single submitter hereditary hyperekplexia
  • p.Gly249= Single submitter hereditary hyperekplexia
  • p.Gly358= Single submitter hereditary hyperekplexia
  • p.Gly360= Single submitter hereditary hyperekplexia
  • p.Gly370= Single submitter hereditary hyperekplexia
  • p.Gly384= Single submitter hereditary hyperekplexia
  • p.His137= Single submitter hereditary hyperekplexia
  • p.Ile15= Single submitter hereditary hyperekplexia
  • p.Ile160= Single submitter hereditary hyperekplexia
  • p.Ile262= Single submitter hereditary hyperekplexia
  • p.Ile415= Single submitter hereditary hyperekplexia
  • p.Leu11= Single submitter hereditary hyperekplexia
  • p.Leu126= Single submitter hereditary hyperekplexia
  • p.Leu145= Single submitter hereditary hyperekplexia
  • p.Leu164= Single submitter hereditary hyperekplexia
  • p.Leu212= Single submitter hereditary hyperekplexia
  • p.Leu252= Single submitter
  • p.Leu327= Single submitter hereditary hyperekplexia
  • p.Leu42= Single submitter hereditary hyperekplexia
  • p.Leu428= Single submitter hereditary hyperekplexia
  • p.Leu92= Single submitter hereditary hyperekplexia
  • p.Lys383= Single submitter hereditary hyperekplexia
  • p.Lys413= Single submitter hereditary hyperekplexia
  • p.Phe17= Single submitter hereditary hyperekplexia
  • p.Phe18= Single submitter hereditary hyperekplexia
  • p.Pro258= Single submitter hereditary hyperekplexia
  • p.Pro33= Single submitter hereditary hyperekplexia
  • p.Pro393= Single submitter hereditary hyperekplexia
  • p.Pro395= Single submitter hereditary hyperekplexia
  • p.Pro99= Single submitter hereditary hyperekplexia
  • p.Ser120= Single submitter hereditary hyperekplexia
  • p.Ser157= Single submitter hereditary hyperekplexia
  • p.Ser266= Single submitter hereditary hyperekplexia
  • p.Ser269= Single submitter hereditary hyperekplexia
  • p.Ser296= Single submitter hereditary hyperekplexia
  • p.Ser31= Single submitter hereditary hyperekplexia
  • p.Ser324= Single submitter hereditary hyperekplexia
  • p.Ser50= Single submitter hereditary hyperekplexia
  • p.Ser68= Single submitter hereditary hyperekplexia
  • p.Thr14= Single submitter hereditary hyperekplexia
  • p.Thr141= Single submitter hereditary hyperekplexia
  • p.Thr161= Single submitter hereditary hyperekplexia
  • p.Thr179= Single submitter hereditary hyperekplexia
  • p.Thr190= Single submitter hereditary hyperekplexia
  • p.Thr227= Single submitter hereditary hyperekplexia
  • p.Thr286= Single submitter hereditary hyperekplexia
  • p.Thr292= Single submitter hereditary hyperekplexia
  • p.Thr293= Single submitter hereditary hyperekplexia
  • p.Thr49= Single submitter hereditary hyperekplexia
  • p.Thr6= Single submitter hereditary hyperekplexia
  • p.Tyr10= Single submitter hereditary hyperekplexia
  • p.Tyr156= Single submitter hereditary hyperekplexia
  • p.Tyr230= Single submitter hereditary hyperekplexia
  • p.Tyr251= Single submitter hereditary hyperekplexia
  • p.Tyr329= Single submitter
  • p.Tyr367= Single submitter hereditary hyperekplexia
  • p.Val281= Single submitter hereditary hyperekplexia
  • p.Val317= Single submitter hereditary hyperekplexia
  • p.Val332= Single submitter hereditary hyperekplexia

Uncertain significance 246