GNAI3 — 101 ClinVar variants
All ClinVar germline GNAI3 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 54 flagged for review →
2 Pathogenic · 2 Pathogenic/Likely pathogenic · 4 Likely pathogenic · 1 Conflicting · 10 Benign · 2 Benign/Likely benign · 24 Likely benign · 56 Uncertain significance
Full GNAI3 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 54
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
GNAI3 p.Gly134Ser
Conflicting
Single submitter
Inborn genetic diseases
Predictors lean, ClinVar uncertain 41
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
- GNAI3 p.Gly292Cys Uncertain significance Multiple submitters
-
GNAI3 p.Ile49Thr
Uncertain significance
Multiple submitters
auriculocondylar syndrome 1
-
GNAI3 p.Lys10Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
GNAI3 p.Arg129Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Arg176Gln
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Arg178Ser Uncertain significance Single submitter
-
GNAI3 p.Arg242Pro
Uncertain significance
Single submitter
auriculocondylar syndrome 1
- GNAI3 p.Asn331Ile Uncertain significance Single submitter
- GNAI3 p.Asp26Asn Uncertain significance Single submitter
-
GNAI3 p.Cys214Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Cys325Phe Uncertain significance Single submitter
-
GNAI3 p.Glu238Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Glu43Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Gly125Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Gly134Val
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Gly27Trp Uncertain significance Single submitter
-
GNAI3 p.Gly60Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.His57Tyr Uncertain significance Single submitter
-
GNAI3 p.Ile264Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ile49Val
Uncertain significance
Single submitter
auriculocondylar syndrome 1
-
GNAI3 p.Ile84Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Leu148Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Leu175Val
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Leu91Gln Uncertain significance Single submitter
-
GNAI3 p.Lys257Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Lys277Glu
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Lys32Arg Uncertain significance Single submitter
- GNAI3 p.Lys51Glu Uncertain significance Single submitter
- GNAI3 p.Met53Val Uncertain significance Single submitter
-
GNAI3 p.Phe140Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Pro169Ser Uncertain significance Single submitter
-
GNAI3 p.Ser151Pro
Uncertain significance
Single submitter
auriculocondylar syndrome 1
-
GNAI3 p.Ser228Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ser252Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ser293Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ser47Ile
Uncertain significance
Single submitter
auriculocondylar syndrome 1
-
GNAI3 p.Ser80Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Thr329Met Uncertain significance Single submitter
-
GNAI3 p.Tyr69Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Val332Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ile344Thr
Uncertain significance
No assertion criteria
GNAI3-related disorder
Predictors split 12
The independent predictors disagree with each other — read with care.
-
GNAI3 p.Phe108Leu
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
GNAI3 p.Ala41Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Asn346Ile Uncertain significance Single submitter
-
GNAI3 p.Glu318Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
GNAI3 p.Ile221Val
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Ile285Val Uncertain significance Single submitter
- GNAI3 p.Leu123Val Likely benign Single submitter
-
GNAI3 p.Lys317Arg
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Ser75Asn Uncertain significance Single submitter
-
GNAI3 p.Ser75Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- GNAI3 p.Thr295Ala Uncertain significance Single submitter
-
GNAI3 p.Arg21His
Likely benign
No assertion criteria
GNAI3-related disorder
All GNAI3 variants
Pathogenic 2
- p.Glu216Ter Single submitter auriculocondylar syndrome 1
- p.Ser47Arg No assertion criteria auriculocondylar syndrome 1
Pathogenic/Likely pathogenic 2
- p.Gly40Arg Multiple submitters auriculocondylar syndrome 1
- p.Ser47Asn Multiple submitters auriculocondylar syndrome 1
Likely pathogenic 4
- p.Gly40Val Multiple submitters
- p.Asn269Tyr Single submitter auriculocondylar syndrome 1
- p.Lys46Glu Single submitter auriculocondylar syndrome 1
- p.Thr48Asn Single submitter
Conflicting classifications of pathogenicity 1
- p.Gly134Ser Single submitter Inborn genetic diseases ⚠
Benign 10
- c.591-18T>G Multiple submitters
- c.-61C>T Multiple submitters
- c.-72C>T Multiple submitters
- p.Lys35= Multiple submitters
- c.162-7T>C Single submitter
- c.462-15G>A Single submitter
- c.462-171C>T Single submitter
- c.590+198G>A Single submitter
- c.591-193A>G Single submitter
- p.Lys345= Single submitter
Likely benign 24
- p.Arg90Gln Multiple submitters
- p.Thr324= Multiple submitters
- c.118+16C>T Single submitter
- c.161+18G>A Single submitter
- c.462-13G>A Single submitter
- c.591-11C>T Single submitter
- c.591-5C>T Single submitter
- c.721-5_721-4del Single submitter
- c.875-7G>A Single submitter
- p.Ala301= Single submitter
- p.Arg129= Single submitter
- p.Arg24= Single submitter
- p.Asn294= Single submitter
- p.Leu123= Single submitter
- p.Leu123Val Single submitter ⚠
- p.Leu234= Single submitter
- p.Leu266= Single submitter
- p.Leu91= Single submitter
- p.Phe196= Single submitter
- p.Phe95= Single submitter
- p.Thr170Ile Single submitter
- p.Thr190= Single submitter
- p.Arg21His No assertion criteria GNAI3-related disorder ⚠
- p.Leu348= No assertion criteria GNAI3-related disorder
Uncertain significance 56
- p.Gly292Cys Multiple submitters ⚠
- p.Ile49Thr Multiple submitters auriculocondylar syndrome 1 ⚠
- p.Lys10Arg Multiple submitters Inborn genetic diseases ⚠
- p.Phe108Leu Multiple submitters Inborn genetic diseases ⚠
- c.118+1G>C Single submitter
- c.303+1G>A Single submitter auriculocondylar syndrome 1
- p.Ala41Thr Single submitter Inborn genetic diseases ⚠
- p.Arg129Gln Single submitter Inborn genetic diseases ⚠
- p.Arg176Gln Single submitter Inborn genetic diseases ⚠
- p.Arg178Ser Single submitter ⚠
- p.Arg242Pro Single submitter auriculocondylar syndrome 1 ⚠
- p.Asn331Ile Single submitter ⚠
- p.Asn346Ile Single submitter ⚠
- p.Asp26Asn Single submitter ⚠
- p.Cys214Tyr Single submitter Inborn genetic diseases ⚠
- p.Cys325Phe Single submitter ⚠
- p.Glu238Lys Single submitter Inborn genetic diseases ⚠
- p.Glu318Asp Single submitter Inborn genetic diseases ⚠
- p.Glu43Lys Single submitter Inborn genetic diseases ⚠
- p.Gly125Ala Single submitter Inborn genetic diseases ⚠
- p.Gly134Val Single submitter Inborn genetic diseases ⚠
- p.Gly27Arg Single submitter Inborn genetic diseases
- p.Gly27Trp Single submitter ⚠
- p.Gly60Ser Single submitter Inborn genetic diseases ⚠
- p.His57Tyr Single submitter ⚠
- p.Ile221Val Single submitter Inborn genetic diseases ⚠
- p.Ile264Val Single submitter Inborn genetic diseases ⚠
- p.Ile285Val Single submitter ⚠
- p.Ile49Val Single submitter auriculocondylar syndrome 1 ⚠
- p.Ile82Thr Single submitter Inborn genetic diseases
- p.Ile84Val Single submitter Inborn genetic diseases ⚠
- p.Leu148Val Single submitter Inborn genetic diseases ⚠
- p.Leu175Val Single submitter Inborn genetic diseases ⚠
- p.Leu91Gln Single submitter ⚠
- p.Lys257Thr Single submitter Inborn genetic diseases ⚠
- p.Lys277Glu Single submitter Inborn genetic diseases ⚠
- p.Lys317Arg Single submitter Inborn genetic diseases ⚠
- p.Lys32Arg Single submitter ⚠
- p.Lys51Glu Single submitter ⚠
- p.Met198Leu Single submitter
- p.Met53Val Single submitter ⚠
- p.Phe140Cys Single submitter Inborn genetic diseases ⚠
- p.Pro169Ser Single submitter ⚠
- p.Ser151Pro Single submitter auriculocondylar syndrome 1 ⚠
- p.Ser228Ile Single submitter Inborn genetic diseases ⚠
- p.Ser252Gly Single submitter Inborn genetic diseases ⚠
- p.Ser293Cys Single submitter Inborn genetic diseases ⚠
- p.Ser47Ile Single submitter auriculocondylar syndrome 1 ⚠
- p.Ser75Asn Single submitter ⚠
- p.Ser75Gly Single submitter Inborn genetic diseases ⚠
- p.Ser80Tyr Single submitter Inborn genetic diseases ⚠
- p.Thr295Ala Single submitter ⚠
- p.Thr329Met Single submitter ⚠
- p.Tyr69Cys Single submitter Inborn genetic diseases ⚠
- p.Val332Met Single submitter Inborn genetic diseases ⚠
- p.Ile344Thr No assertion criteria GNAI3-related disorder ⚠