HAND2 — 82 ClinVar variants
All ClinVar germline HAND2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 37 flagged for review →
1 Pathogenic · 1 Likely pathogenic · 5 Conflicting · 2 Benign · 4 Benign/Likely benign · 18 Likely benign · 51 Uncertain significance
Full HAND2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 37
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
HAND2 p.Pro90Arg
Conflicting
Single submitter
Inborn genetic diseases
Predictors lean, ClinVar uncertain 22
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
HAND2 p.Gly74Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
HAND2 p.Ala21Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Ala21Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Ala22Thr Uncertain significance Single submitter
-
HAND2 p.Ala72Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Ala72Val
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Ala73Thr Uncertain significance Single submitter
-
HAND2 p.Ala87Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Asn128Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Glu39Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Gly162Asp
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Leu122Pro Uncertain significance Single submitter
- HAND2 p.Lys168Arg Uncertain significance Single submitter
- HAND2 p.Lys216Arg Uncertain significance Single submitter
-
HAND2 p.Pro8Ser
Uncertain significance
Single submitter
HAND2-related disorder
-
HAND2 p.Pro90Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Pro95Ala Uncertain significance Single submitter
- HAND2 p.Pro95Leu Uncertain significance Single submitter
-
HAND2 p.Thr192Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Val129Ile
Uncertain significance
Single submitter
HAND2-related disorder
- HAND2 p.Val193Ala Uncertain significance Single submitter
-
HAND2 p.Val83Leu
Uncertain significance
Single submitter
HAND2-related disorder
Predictors split 14
The independent predictors disagree with each other — read with care.
-
HAND2 p.Gly162Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
HAND2 p.Lys216Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
HAND2 p.Pro97Arg
Uncertain significance
Multiple submitters
HAND2-related disorder
- HAND2 p.Gln217Pro Likely benign Single submitter
- HAND2 p.Glu124Lys Uncertain significance Single submitter
-
HAND2 p.Gly88Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Gly93Arg
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Lys198Asn Conflicting Single submitter
- HAND2 p.Pro11Leu Uncertain significance Single submitter
- HAND2 p.Pro41Thr Uncertain significance Single submitter
-
HAND2 p.Pro8Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- HAND2 p.Ser195Arg Uncertain significance Single submitter
-
HAND2 p.Ser63Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
HAND2 p.Tyr58Cys
Uncertain significance
Single submitter
Inborn genetic diseases
All HAND2 variants
Pathogenic 1
- p.Glu67Ter Single submitter dilated cardiomyopathy 1A
Likely pathogenic 1
- p.Pro130= No assertion criteria
Conflicting classifications of pathogenicity 5
- p.Ala24_Ala32del Single submitter
- p.Ala26_Ala32del Single submitter
- p.Ala69Asp Single submitter Inborn genetic diseases
- p.Lys198Asn Single submitter ⚠
- p.Pro90Arg Single submitter Inborn genetic diseases ⚠
Benign 2
- p.Pro51= Multiple submitters
- p.Ser36Asn Single submitter
Benign/Likely benign 4
- c.556-18C>G Multiple submitters
- p.Asp153= Multiple submitters
- p.Pro8= Multiple submitters
- p.Pro97= Multiple submitters
Likely benign 18
- p.Ala164= Multiple submitters
- p.Ala21Thr Multiple submitters
- p.Ala25= Multiple submitters
- p.Gly94Glu Multiple submitters
- c.555+9C>T Single submitter
- c.*11_*13del Single submitter
- c.*11A>G Single submitter
- p.Ala131= Single submitter
- p.Arg101= Single submitter
- p.Gln217Pro Single submitter ⚠
- p.Glu38= Single submitter
- p.Gly71= Single submitter
- p.His14= Single submitter Inborn genetic diseases
- p.Leu135= Single submitter
- p.Lys201= Single submitter
- p.Phe119= Single submitter
- p.Glu108= No assertion criteria HAND2-related disorder
- p.Pro84= No assertion criteria HAND2-related disorder
Uncertain significance 51
- p.Glu38Gln Multiple submitters HAND2-related disorder
- p.Gly162Ser Multiple submitters Inborn genetic diseases ⚠
- p.Gly74Ser Multiple submitters Inborn genetic diseases ⚠
- p.Lys216Asn Multiple submitters Inborn genetic diseases ⚠
- p.Pro97Arg Multiple submitters HAND2-related disorder ⚠
- p.Ala21Gly Single submitter Inborn genetic diseases ⚠
- p.Ala21Ser Single submitter Inborn genetic diseases ⚠
- p.Ala22Thr Single submitter ⚠
- p.Ala23Val Single submitter Inborn genetic diseases
- p.Ala25_Ala32del Single submitter
- p.Ala27_Ala32del Single submitter
- p.Ala28_Ala32del Single submitter
- p.Ala32_Ser33insAla Single submitter
- p.Ala32_Ser33insAlaAla Single submitter
- p.Ala72Thr Single submitter Inborn genetic diseases ⚠
- p.Ala72Val Single submitter Inborn genetic diseases ⚠
- p.Ala73Thr Single submitter ⚠
- p.Ala87Ser Single submitter Inborn genetic diseases ⚠
- p.Asn128Ser Single submitter Inborn genetic diseases ⚠
- p.Asp76Ala Single submitter Inborn genetic diseases
- p.Glu124Lys Single submitter ⚠
- p.Glu39Asp Single submitter Inborn genetic diseases ⚠
- p.Gly162Asp Single submitter Inborn genetic diseases ⚠
- p.Gly5Ser Single submitter Inborn genetic diseases
- p.Gly88Arg Single submitter Inborn genetic diseases ⚠
- p.Gly93Arg Single submitter Inborn genetic diseases ⚠
- p.Gly93Trp Single submitter
- p.His15Arg Single submitter Inborn genetic diseases
- p.His9Gln Single submitter
- p.Leu122Pro Single submitter ⚠
- p.Lys168Arg Single submitter ⚠
- p.Lys216Arg Single submitter ⚠
- p.Pro11Leu Single submitter ⚠
- p.Pro41Thr Single submitter ⚠
- p.Pro8Leu Single submitter Inborn genetic diseases ⚠
- p.Pro8Ser Single submitter HAND2-related disorder ⚠
- p.Pro90fs Single submitter
- p.Pro90Leu Single submitter Inborn genetic diseases ⚠
- p.Pro95Ala Single submitter ⚠
- p.Pro95Leu Single submitter ⚠
- p.Ser136fs Single submitter
- p.Ser195Arg Single submitter ⚠
- p.Ser63Tyr Single submitter Inborn genetic diseases ⚠
- p.Thr192Pro Single submitter Inborn genetic diseases ⚠
- p.Trp46Ter Single submitter
- p.Tyr58Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr80fs Single submitter
- p.Val129Ile Single submitter HAND2-related disorder ⚠
- p.Val193Ala Single submitter ⚠
- p.Val83Leu Single submitter HAND2-related disorder ⚠
- p.Pro95fs No assertion criteria HAND2-related disorder