HSD17B10 — 187 ClinVar variants
All ClinVar germline HSD17B10 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 66 flagged for review →
7 Pathogenic · 2 Pathogenic/Likely pathogenic · 10 Likely pathogenic · 10 Conflicting · 2 Benign · 2 Benign/Likely benign · 97 Likely benign · 57 Uncertain significance
Full HSD17B10 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 66
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors vs ClinVar 6
ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.
-
HSD17B10 p.Arg130Cys
Pathogenic
Multiple submitters
HSD10 mitochondrial disease
-
HSD17B10 p.Lys212Glu
Pathogenic/Likely pathogenic
Multiple submitters
HSD10 mitochondrial disease
-
HSD17B10 p.Asn127Ser
Likely pathogenic
Single submitter
HSD17B10-related disorder
-
HSD17B10 p.Gly55Glu
Likely pathogenic
Single submitter
HSD10 mitochondrial disease
-
HSD17B10 p.Ile251Met
Likely pathogenic
Single submitter
HSD10 mitochondrial disease
-
HSD17B10 p.Asn247Ser
Pathogenic
No assertion criteria
HSD10 mitochondrial disease
Predictors agree, ClinVar conflicts 6
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
HSD17B10 p.Leu75Val
Conflicting
Single submitter
Inborn genetic diseases
-
HSD17B10 p.Thr108Ile
Conflicting
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Thr125Ile Conflicting Single submitter
-
HSD17B10 p.Tyr168His
Conflicting
Single submitter
HSD10 mitochondrial disease
-
HSD17B10 p.Val87Ile
Conflicting
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Val96Met Conflicting Single submitter
Predictors lean, ClinVar uncertain 33
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
HSD17B10 p.Asn139Ser
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
HSD17B10 p.Asp229Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
HSD17B10 p.Cys5Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
- HSD17B10 p.Leu111Phe Uncertain significance Multiple submitters
- HSD17B10 p.Val250Ile Uncertain significance Multiple submitters
- HSD17B10 p.Ala13Thr Uncertain significance Single submitter
- HSD17B10 p.Ala170Thr Uncertain significance Single submitter
- HSD17B10 p.Ala49Gly Uncertain significance Single submitter
-
HSD17B10 p.Ala4Gly
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Ala88Thr Uncertain significance Single submitter
- HSD17B10 p.Arg258Cys Uncertain significance Single submitter
- HSD17B10 p.Arg29Gln Uncertain significance Single submitter
- HSD17B10 p.Arg6Gln Uncertain significance Single submitter
- HSD17B10 p.Arg84His Uncertain significance Single submitter
-
HSD17B10 p.Cys5Tyr
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Gln33Arg Uncertain significance Single submitter
- HSD17B10 p.Gln72Lys Uncertain significance Single submitter
-
HSD17B10 p.Glu249Gln
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Glu48Ala Uncertain significance Single submitter
-
HSD17B10 p.Gly134Ala
Uncertain significance
Single submitter
Inborn genetic diseases
- HSD17B10 p.Gly137Ser Uncertain significance Single submitter
-
HSD17B10 p.Gly21Val
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Ile129Val Uncertain significance Single submitter
- HSD17B10 p.Ile182Ser Uncertain significance Single submitter
- HSD17B10 p.Leu42Val Uncertain significance Single submitter
- HSD17B10 p.Pro244Gln Uncertain significance Single submitter
- HSD17B10 p.Ser7Asn Uncertain significance Single submitter
- HSD17B10 p.Ser98Ile Uncertain significance Single submitter
-
HSD17B10 p.Val117Ile
Uncertain significance
Single submitter
Inborn genetic diseases
- HSD17B10 p.Val59Ile Uncertain significance Single submitter
-
HSD17B10 p.Val65Ala
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Val65Met Uncertain significance Single submitter
-
HSD17B10 p.Thr73Arg
Uncertain significance
No assertion criteria
HSD10 mitochondrial disease
Predictors split 21
The independent predictors disagree with each other — read with care.
-
HSD17B10 p.Arg116Gln
Uncertain significance
Multiple submitters
HSD10 mitochondrial disease
- HSD17B10 p.Asn152Ser Uncertain significance Multiple submitters
-
HSD17B10 p.Leu122Val
Uncertain significance
Multiple submitters
HSD10 mitochondrial disease
-
HSD17B10 p.Thr100Met
Uncertain significance
Multiple submitters
Inborn genetic diseases
- HSD17B10 p.Val163Ala Uncertain significance Multiple submitters
- HSD17B10 p.Ala19Gly Conflicting Single submitter
- HSD17B10 p.Ala78Gly Uncertain significance Single submitter
-
HSD17B10 p.Ala78Val
Likely benign
Single submitter
Inborn genetic diseases
- HSD17B10 p.Ala95Thr Benign Single submitter
- HSD17B10 p.Ala95Val Conflicting Single submitter
-
HSD17B10 p.Arg147Cys
Conflicting
Single submitter
Inborn genetic diseases
- HSD17B10 p.Arg84Cys Uncertain significance Single submitter
- HSD17B10 p.Asp70Gly Uncertain significance Single submitter
- HSD17B10 p.Gly46Arg Uncertain significance Single submitter
- HSD17B10 p.Ile182Thr Uncertain significance Single submitter
- HSD17B10 p.Lys81Asn Uncertain significance Single submitter
-
HSD17B10 p.Pro141Arg
Uncertain significance
Single submitter
HSD10 mitochondrial disease
- HSD17B10 p.Ser20Ala Uncertain significance Single submitter
- HSD17B10 p.Val237Ile Uncertain significance Single submitter
-
HSD17B10 p.Val38Ala
Uncertain significance
Single submitter
HSD10 mitochondrial disease
-
HSD17B10 p.Val85Met
Uncertain significance
Single submitter
HSD10 mitochondrial disease
All HSD17B10 variants
Pathogenic 7
- p.Arg130Cys Multiple submitters HSD10 mitochondrial disease ⚠
- p.Arg184Gln Single submitter HSD10 mitochondrial disease
- p.Arg184Trp Single submitter HSD10 mitochondrial disease
- p.Glu112fs Single submitter
- p.Arg192= No assertion criteria HSD10 mitochondrial disease
- p.Asn247Ser No assertion criteria HSD10 mitochondrial disease ⚠
- p.Asp86Gly No assertion criteria HSD10 mitochondrial disease
Pathogenic/Likely pathogenic 2
- p.Arg226Gln Multiple submitters HSD10 mitochondrial disease
- p.Lys212Glu Multiple submitters HSD10 mitochondrial disease ⚠
Likely pathogenic 10
- p.Arg29Gly Single submitter HSD10 mitochondrial disease
- p.Asn127Ser Single submitter HSD17B10-related disorder ⚠
- p.Gly173Arg Single submitter HSD10 mitochondrial disease
- p.Gly55Glu Single submitter HSD10 mitochondrial disease ⚠
- p.Ile251Met Single submitter HSD10 mitochondrial disease ⚠
- p.Leu236Phe Single submitter HSD10 mitochondrial disease
- p.Pro198Thr Single submitter HSD10 mitochondrial disease
- p.Pro210Ala Single submitter
- p.Ser20Leu Single submitter HSD10 mitochondrial disease
- p.Ser20Trp Single submitter HSD17B10-related disorder
Conflicting classifications of pathogenicity 10
- p.Ala19Gly Single submitter ⚠
- p.Ala49= Single submitter
- p.Ala95Val Single submitter ⚠
- p.Arg147Cys Single submitter Inborn genetic diseases ⚠
- p.Leu75Val Single submitter Inborn genetic diseases ⚠
- p.Thr108Ile Single submitter HSD10 mitochondrial disease ⚠
- p.Thr125Ile Single submitter ⚠
- p.Tyr168His Single submitter HSD10 mitochondrial disease ⚠
- p.Val87Ile Single submitter HSD10 mitochondrial disease ⚠
- p.Val96Met Single submitter ⚠
Benign 2
- c.192+10del Single submitter
- p.Ala95Thr Single submitter ⚠
Benign/Likely benign 2
- c.192+19C>T Multiple submitters
- c.27+19C>T Multiple submitters
Likely benign 97
- c.28-140C>T Multiple submitters
- c.486+9G>A Multiple submitters
- c.595+17_595+20del Multiple submitters
- p.Glu211= Multiple submitters
- p.Glu48= Multiple submitters
- p.Thr100= Multiple submitters
- c.192+12C>G Single submitter
- c.192+12C>T Single submitter
- c.192+14C>T Single submitter
- c.192+7G>A Single submitter
- c.193-10_193-7del Single submitter
- c.193-12CT[2] Single submitter
- c.193-15C>T Single submitter
- c.193-16A>G Single submitter
- c.193-4G>A Single submitter
- c.27+10T>C Single submitter
- c.27+17C>G Single submitter
- c.27+17C>T Single submitter
- c.27+19C>G Single submitter
- c.27+20T>G Single submitter
- c.27+7G>A Single submitter
- c.28-16A>G Single submitter
- c.28-20G>A Single submitter
- c.28-4A>T Single submitter
- c.28-6del Single submitter
- c.28-6T>C Single submitter
- c.357+11G>A Single submitter
- c.358-11C>G Single submitter
- c.358-13A>G Single submitter
- c.358-15C>T Single submitter
- c.486+14_486+15delinsTT Single submitter
- c.486+19G>A Single submitter
- c.486+9G>T Single submitter
- c.487-10C>G Single submitter
- c.487-13A>C Single submitter
- c.487-13A>G Single submitter
- c.487-15C>A Single submitter
- c.487-16T>C Single submitter
- c.487-18C>T Single submitter
- c.487-6C>T Single submitter
- c.595+12C>T Single submitter
- c.595+41G>A Single submitter
- c.595+8T>C Single submitter
- c.596-11A>G Single submitter
- c.596-13C>T Single submitter
- c.596-19A>T Single submitter
- c.596-8T>C Single submitter
- p.Ala13= Single submitter
- p.Ala2= Single submitter
- p.Ala231= Single submitter
- p.Ala4= Single submitter
- p.Ala63= Single submitter
- p.Ala78Val Single submitter Inborn genetic diseases ⚠
- p.Ala92= Single submitter
- p.Ala95= Single submitter
- p.Arg258= Single submitter
- p.Arg6= Single submitter
- p.Asn247= Single submitter
- p.Asn57= Single submitter
- p.Asp119= Single submitter
- p.Asp41= Single submitter
- p.Cys5= Single submitter
- p.Cys91= Single submitter
- p.Gly106= Single submitter
- p.Gly148= Single submitter
- p.Gly177= Single submitter
- p.Gly34= Single submitter
- p.Gly47= Single submitter
- p.Gly80= Single submitter
- p.Gly80Ala Single submitter
- p.Gly93= Single submitter
- p.Ile150= Single submitter
- p.Ile151= Single submitter
- p.Ile241= Single submitter
- p.Leu103= Single submitter
- p.Leu11= Single submitter
- p.Leu118= Single submitter
- p.Leu206Val Single submitter
- p.Leu236= Single submitter
- p.Leu30= Single submitter
- p.Lys105Thr Single submitter
- p.Lys212= Single submitter
- p.Lys81= Single submitter
- p.Met123Leu Single submitter Inborn genetic diseases
- p.Phe159= Single submitter
- p.Phe60= Single submitter
- p.Pro181= Single submitter
- p.Pro222= Single submitter
- p.Ser67= Single submitter
- p.Thr110= Single submitter
- p.Thr26= Single submitter
- p.Tyr101= Single submitter
- p.Val237= Single submitter
- p.Val250= Single submitter
- p.Val65= Single submitter
- p.Val96= Single submitter
- p.Ala166= No assertion criteria HSD17B10-related disorder
Uncertain significance 57
- c.486+3G>A Multiple submitters
- p.Arg116Gln Multiple submitters HSD10 mitochondrial disease ⚠
- p.Asn139Ser Multiple submitters Inborn genetic diseases ⚠
- p.Asn152Ser Multiple submitters ⚠
- p.Asp229Asn Multiple submitters Inborn genetic diseases ⚠
- p.Cys5Arg Multiple submitters Inborn genetic diseases ⚠
- p.Leu111Phe Multiple submitters ⚠
- p.Leu122Val Multiple submitters HSD10 mitochondrial disease ⚠
- p.Thr100Met Multiple submitters Inborn genetic diseases ⚠
- p.Val163Ala Multiple submitters ⚠
- p.Val250Ile Multiple submitters ⚠
- c.27+3A>G Single submitter
- c.486+15del Single submitter HSD10 mitochondrial disease
- c.*9G>C Single submitter
- p.Ala13Thr Single submitter ⚠
- p.Ala170Thr Single submitter ⚠
- p.Ala49Gly Single submitter ⚠
- p.Ala4Gly Single submitter HSD10 mitochondrial disease ⚠
- p.Ala78Gly Single submitter ⚠
- p.Ala88Thr Single submitter ⚠
- p.Arg258Cys Single submitter ⚠
- p.Arg29Gln Single submitter ⚠
- p.Arg6Gln Single submitter ⚠
- p.Arg84Cys Single submitter ⚠
- p.Arg84His Single submitter ⚠
- p.Asp70Gly Single submitter ⚠
- p.Cys5Tyr Single submitter HSD10 mitochondrial disease ⚠
- p.Gln220His Single submitter HSD10 mitochondrial disease
- p.Gln33Arg Single submitter ⚠
- p.Gln72Lys Single submitter ⚠
- p.Glu160= Single submitter
- p.Glu249Gln Single submitter HSD10 mitochondrial disease ⚠
- p.Glu48Ala Single submitter ⚠
- p.Gly134Ala Single submitter Inborn genetic diseases ⚠
- p.Gly137Ser Single submitter ⚠
- p.Gly21Val Single submitter HSD10 mitochondrial disease ⚠
- p.Gly46Arg Single submitter ⚠
- p.Ile129Val Single submitter ⚠
- p.Ile182Ser Single submitter ⚠
- p.Ile182Thr Single submitter ⚠
- p.Leu122= Single submitter
- p.Leu200= Single submitter
- p.Leu42Val Single submitter ⚠
- p.Lys81Asn Single submitter ⚠
- p.Pro141Arg Single submitter HSD10 mitochondrial disease ⚠
- p.Pro244Gln Single submitter ⚠
- p.Ser20Ala Single submitter ⚠
- p.Ser7Asn Single submitter ⚠
- p.Ser98Ile Single submitter ⚠
- p.Val117Ile Single submitter Inborn genetic diseases ⚠
- p.Val237Ile Single submitter ⚠
- p.Val38Ala Single submitter HSD10 mitochondrial disease ⚠
- p.Val59Ile Single submitter ⚠
- p.Val65Ala Single submitter HSD10 mitochondrial disease ⚠
- p.Val65Met Single submitter ⚠
- p.Val85Met Single submitter HSD10 mitochondrial disease ⚠
- p.Thr73Arg No assertion criteria HSD10 mitochondrial disease ⚠