IL36RN — 207 ClinVar variants

All ClinVar germline IL36RN variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 59 flagged for review →

8 Pathogenic · 1 Pathogenic/Likely pathogenic · 4 Likely pathogenic · 22 Conflicting · 17 Benign · 2 Benign/Likely benign · 56 Likely benign · 97 Uncertain significance

Full IL36RN gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 59

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 5

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 42

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

All IL36RN variants

Pathogenic 8

  • p.Leu27Pro Multiple submitters IL36RN-related disorders
  • p.Ala6fs Single submitter generalized pustular psoriasis
  • p.Ala92fs Single submitter generalized pustular psoriasis
  • p.Gln62Ter Single submitter generalized pustular psoriasis
  • p.Gly141fs Single submitter generalized pustular psoriasis
  • p.Ser14Ter Single submitter generalized pustular psoriasis
  • p.Ser69fs Single submitter psoriasis 14, pustular
  • p.Thr123Arg No assertion criteria psoriasis 14, pustular

Pathogenic/Likely pathogenic 1

  • c.115+6T>C Multiple submitters autoinflammatory syndrome

Likely pathogenic 4

  • c.29+1G>A Single submitter generalized pustular psoriasis
  • c.30-1G>T Single submitter generalized pustular psoriasis
  • c.30-2A>G Single submitter generalized pustular psoriasis
  • p.Ser113Ter Single submitter psoriasis 14, pustular

Conflicting classifications of pathogenicity 22

  • c.244-6C>T Single submitter autoinflammatory syndrome
  • c.*222T>C Single submitter psoriasis 14, pustular
  • c.*276A>G Single submitter psoriasis 14, pustular
  • c.*326C>A Single submitter psoriasis 14, pustular
  • c.*401A>T Single submitter psoriasis 14, pustular
  • c.*418A>G Single submitter psoriasis 14, pustular
  • c.*560C>G Single submitter psoriasis 14, pustular
  • p.Ala127= Single submitter autoinflammatory syndrome
  • p.Arg103Trp Single submitter generalized pustular psoriasis ⚠
  • p.Arg10Ter Single submitter IL36RN-related disorders
  • p.Arg48Trp Single submitter IL36RN-related disorders ⚠
  • p.Gly141Ser Single submitter generalized pustular psoriasis ⚠
  • p.Ile146Val Single submitter generalized pustular psoriasis ⚠
  • p.Leu121= Single submitter autoinflammatory syndrome
  • p.Phe111= Single submitter generalized pustular psoriasis
  • p.Pro117= Single submitter generalized pustular psoriasis
  • p.Pro76Leu Single submitter generalized pustular psoriasis ⚠
  • p.Pro82Leu Single submitter generalized pustular psoriasis ⚠
  • p.Ser113Leu Single submitter IL36RN-related disorders
  • p.Thr123Met Single submitter psoriasis 14, pustular
  • p.Val2= Single submitter generalized pustular psoriasis
  • p.Val57Ile Single submitter autoinflammatory syndrome ⚠

Benign 17

  • c.*1082C>A Multiple submitters generalized pustular psoriasis
  • c.*1399T>C Multiple submitters generalized pustular psoriasis
  • c.*1633C>T Multiple submitters generalized pustular psoriasis
  • c.*1634A>G Multiple submitters generalized pustular psoriasis
  • c.*1881G>T Multiple submitters generalized pustular psoriasis
  • c.*1914C>T Multiple submitters generalized pustular psoriasis
  • c.*1987G>A Multiple submitters generalized pustular psoriasis
  • c.*478T>C Multiple submitters generalized pustular psoriasis
  • c.*828G>A Multiple submitters generalized pustular psoriasis
  • c.*863C>T Multiple submitters generalized pustular psoriasis
  • c.*946T>C Multiple submitters generalized pustular psoriasis
  • c.115+118G>A Single submitter
  • c.116-87T>C Single submitter
  • c.29+137C>T Single submitter
  • c.-27-47A>C Single submitter
  • c.-27-49C>G Single submitter
  • c.*935G>C Single submitter generalized pustular psoriasis

Benign/Likely benign 2

  • p.Asn47Ser Multiple submitters autoinflammatory syndrome
  • p.Thr123= Multiple submitters autoinflammatory syndrome

Likely benign 56

  • c.115+15A>G Multiple submitters generalized pustular psoriasis
  • c.*1902T>C Multiple submitters generalized pustular psoriasis
  • c.*308T>G Multiple submitters generalized pustular psoriasis
  • p.Gln25= Multiple submitters generalized pustular psoriasis
  • p.Leu80= Multiple submitters generalized pustular psoriasis
  • p.Phe149= Multiple submitters generalized pustular psoriasis
  • p.Ser113= Multiple submitters generalized pustular psoriasis
  • c.115+14C>T Single submitter generalized pustular psoriasis
  • c.115+7G>A Single submitter generalized pustular psoriasis
  • c.115+8A>T Single submitter
  • c.115+9T>C Single submitter generalized pustular psoriasis
  • c.116-11C>T Single submitter generalized pustular psoriasis
  • c.116-5C>G Single submitter generalized pustular psoriasis
  • c.116-6C>T Single submitter generalized pustular psoriasis
  • c.243+16T>C Single submitter generalized pustular psoriasis
  • c.243+20C>T Single submitter generalized pustular psoriasis
  • c.244-10C>A Single submitter generalized pustular psoriasis
  • c.244-13C>A Single submitter generalized pustular psoriasis
  • c.244-13C>T Single submitter generalized pustular psoriasis
  • c.244-15C>T Single submitter generalized pustular psoriasis
  • c.244-17C>T Single submitter generalized pustular psoriasis
  • c.244-9_244-6del Single submitter generalized pustular psoriasis
  • c.29+15C>A Single submitter generalized pustular psoriasis
  • c.29+15C>G Single submitter generalized pustular psoriasis
  • c.29+15C>T Single submitter generalized pustular psoriasis
  • c.29+7G>A Single submitter generalized pustular psoriasis
  • c.30-12C>T Single submitter generalized pustular psoriasis
  • c.30-13C>T Single submitter generalized pustular psoriasis
  • c.30-18C>A Single submitter generalized pustular psoriasis
  • c.*1660G>A Single submitter generalized pustular psoriasis
  • c.*1763G>A Single submitter generalized pustular psoriasis
  • c.*281G>A Single submitter generalized pustular psoriasis
  • p.Ala6= Single submitter generalized pustular psoriasis
  • p.Arg102= Single submitter generalized pustular psoriasis
  • p.Arg103= Single submitter generalized pustular psoriasis
  • p.Cys122= Single submitter generalized pustular psoriasis
  • p.Cys70= Single submitter generalized pustular psoriasis
  • p.Gln129= Single submitter generalized pustular psoriasis
  • p.Glu94= Single submitter generalized pustular psoriasis
  • p.Gly106= Single submitter generalized pustular psoriasis
  • p.Gly30= Single submitter generalized pustular psoriasis
  • p.Gly34= Single submitter generalized pustular psoriasis
  • p.Leu50= Single submitter generalized pustular psoriasis
  • p.Lys96= Single submitter generalized pustular psoriasis
  • p.Pro125= Single submitter generalized pustular psoriasis
  • p.Pro137= Single submitter generalized pustular psoriasis
  • p.Pro145= Single submitter generalized pustular psoriasis
  • p.Pro56= Single submitter generalized pustular psoriasis
  • p.Pro76= Single submitter generalized pustular psoriasis
  • p.Ser14= Single submitter generalized pustular psoriasis
  • p.Ser55= Single submitter generalized pustular psoriasis
  • p.Ser97= Single submitter generalized pustular psoriasis
  • p.Thr147= Single submitter generalized pustular psoriasis
  • p.Thr79= Single submitter generalized pustular psoriasis
  • p.Tyr116= Single submitter generalized pustular psoriasis
  • p.Val124= Single submitter generalized pustular psoriasis

Uncertain significance 97

  • c.115+5G>A Multiple submitters autoinflammatory syndrome
  • c.244-5G>A Multiple submitters autoinflammatory syndrome
  • c.*401A>C Multiple submitters generalized pustular psoriasis
  • p.Arg102Trp Multiple submitters psoriasis 14, pustular
  • p.Arg103Gln Multiple submitters autoinflammatory syndrome ⚠
  • p.Arg10Gln Multiple submitters autoinflammatory syndrome ⚠
  • p.Glu112Lys Multiple submitters generalized pustular psoriasis ⚠
  • p.Gly106Ala Multiple submitters autoinflammatory syndrome
  • p.Gly63Val Multiple submitters Inborn genetic diseases ⚠
  • p.Leu133fs Multiple submitters generalized pustular psoriasis
  • p.Lys35Arg Multiple submitters generalized pustular psoriasis ⚠
  • p.Lys93Glu Multiple submitters generalized pustular psoriasis ⚠
  • p.Met105Val Multiple submitters Inborn genetic diseases ⚠
  • p.Phe151Ile Multiple submitters generalized pustular psoriasis ⚠
  • p.Pro117Ala Multiple submitters Inborn genetic diseases ⚠
  • p.Pro46Ser Multiple submitters generalized pustular psoriasis ⚠
  • p.Thr77Ile Multiple submitters generalized pustular psoriasis ⚠
  • p.Tyr89Cys Multiple submitters generalized pustular psoriasis
  • p.Val44Leu Multiple submitters Inborn genetic diseases ⚠
  • p.Val45Ala Multiple submitters Inborn genetic diseases ⚠
  • p.Val83Glu Multiple submitters Inborn genetic diseases ⚠
  • c.115+4G>A Single submitter generalized pustular psoriasis
  • c.244-9T>A Single submitter generalized pustular psoriasis
  • c.29+3G>A Single submitter autoinflammatory syndrome
  • c.29+5G>A Single submitter generalized pustular psoriasis
  • c.29+6T>C Single submitter generalized pustular psoriasis
  • c.30-14T>A Single submitter generalized pustular psoriasis
  • c.-27-299G>C Single submitter generalized pustular psoriasis
  • c.-28+1G>A Single submitter psoriasis 14, pustular
  • c.-47G>A Single submitter generalized pustular psoriasis
  • c.*1051T>C Single submitter generalized pustular psoriasis
  • c.*106G>A Single submitter generalized pustular psoriasis
  • c.*1244A>G Single submitter generalized pustular psoriasis
  • c.*1258C>A Single submitter generalized pustular psoriasis
  • c.*1405G>T Single submitter generalized pustular psoriasis
  • c.*1585A>G Single submitter generalized pustular psoriasis
  • c.*15dup Single submitter autoinflammatory syndrome
  • c.*1641C>G Single submitter generalized pustular psoriasis
  • c.*1698G>A Single submitter generalized pustular psoriasis
  • c.*1844A>G Single submitter generalized pustular psoriasis
  • c.*1849T>A Single submitter generalized pustular psoriasis
  • c.*1866T>C Single submitter generalized pustular psoriasis
  • c.*1891G>A Single submitter generalized pustular psoriasis
  • c.*1942C>G Single submitter generalized pustular psoriasis
  • c.*1995T>C Single submitter generalized pustular psoriasis
  • c.*298G>A Single submitter generalized pustular psoriasis
  • c.*426G>T Single submitter generalized pustular psoriasis
  • c.*581C>G Single submitter generalized pustular psoriasis
  • c.*594T>C Single submitter generalized pustular psoriasis
  • c.*6C>T Single submitter generalized pustular psoriasis
  • c.*720G>T Single submitter generalized pustular psoriasis
  • c.*857A>G Single submitter generalized pustular psoriasis
  • c.*866G>A Single submitter generalized pustular psoriasis
  • c.*883T>C Single submitter generalized pustular psoriasis
  • p.Ala15Ser Single submitter ⚠
  • p.Ala33Thr Single submitter generalized pustular psoriasis ⚠
  • p.Ala6Val Single submitter generalized pustular psoriasis ⚠
  • p.Ala92Val Single submitter generalized pustular psoriasis ⚠
  • p.Arg102Gln Single submitter generalized pustular psoriasis ⚠
  • p.Arg48= Single submitter generalized pustular psoriasis
  • p.Arg48Pro Single submitter Inborn genetic diseases
  • p.Asn47Asp Single submitter generalized pustular psoriasis ⚠
  • p.Asn47Ile Single submitter generalized pustular psoriasis ⚠
  • p.Cys67Phe Single submitter generalized pustular psoriasis ⚠
  • p.Cys70Arg Single submitter generalized pustular psoriasis ⚠
  • p.Gln129Arg Single submitter generalized pustular psoriasis ⚠
  • p.Gln153Arg Single submitter generalized pustular psoriasis ⚠
  • p.Glu41Asp Single submitter generalized pustular psoriasis ⚠
  • p.Glu87Lys Single submitter Inborn genetic diseases ⚠
  • p.Gly140Cys Single submitter generalized pustular psoriasis ⚠
  • p.Gly140Ser Single submitter generalized pustular psoriasis ⚠
  • p.Gly141Asp Single submitter generalized pustular psoriasis ⚠
  • p.Gly30Glu Single submitter Inborn genetic diseases ⚠
  • p.Gly34Ala Single submitter ⚠
  • p.Gly39Cys Single submitter psoriasis 14, pustular ⚠
  • p.Gly60Val Single submitter psoriasis 14, pustular ⚠
  • p.Gly64Arg Single submitter Inborn genetic diseases ⚠
  • p.Ile85Val Single submitter generalized pustular psoriasis ⚠
  • p.Leu107Phe Single submitter Inborn genetic diseases ⚠
  • p.Leu31Met Single submitter generalized pustular psoriasis ⚠
  • p.Leu3Pro Single submitter generalized pustular psoriasis
  • p.Pro117Gln Single submitter generalized pustular psoriasis ⚠
  • p.Pro117Leu Single submitter generalized pustular psoriasis ⚠
  • p.Pro145Leu Single submitter Inborn genetic diseases ⚠
  • p.Ser110fs Single submitter generalized pustular psoriasis
  • p.Ser113fs Single submitter generalized pustular psoriasis
  • p.Ser14Ala Single submitter generalized pustular psoriasis ⚠
  • p.Ser55Cys Single submitter generalized pustular psoriasis ⚠
  • p.Ser55Phe Single submitter generalized pustular psoriasis ⚠
  • p.Ser65Asn Single submitter generalized pustular psoriasis ⚠
  • p.Ser97Arg Single submitter generalized pustular psoriasis ⚠
  • p.Thr108Ser Single submitter generalized pustular psoriasis ⚠
  • p.Tyr101Phe Single submitter generalized pustular psoriasis ⚠
  • p.Val2Phe Single submitter ⚠
  • p.Val44Met Single submitter generalized pustular psoriasis ⚠
  • p.Val72Ala Single submitter generalized pustular psoriasis ⚠
  • p.Val72Gly Single submitter Inborn genetic diseases ⚠