LAMC2 — 1224 ClinVar variants

All ClinVar germline LAMC2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 218 flagged for review →

89 Pathogenic · 13 Pathogenic/Likely pathogenic · 112 Likely pathogenic · 41 Conflicting · 76 Benign · 13 Benign/Likely benign · 623 Likely benign · 257 Uncertain significance

Full LAMC2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 218

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 16

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 169

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 169

Predictors split 33

The independent predictors disagree with each other — read with care.

All LAMC2 variants

Pathogenic 89

Pathogenic/Likely pathogenic 13

  • c.3328+1G>A Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • p.Arg170Ter Multiple submitters junctional epidermolysis bullosa
  • p.Arg245Ter Multiple submitters junctional epidermolysis bullosa
  • p.Arg45fs Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • p.Gln1152Ter Multiple submitters junctional epidermolysis bullosa Herlitz type
  • p.Gln692Ter Multiple submitters junctional epidermolysis bullosa
  • p.Gln961Ter Multiple submitters junctional epidermolysis bullosa
  • p.Gly642Ter Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • p.Ile669fs Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • p.Leu1122Ter Multiple submitters epidermolysis bullosa, junctional 3B, severe
  • p.Phe51fs Multiple submitters LAMC2-related disorder
  • p.Ser404Ter Multiple submitters LAMC2-related disorder
  • p.Tyr450Ter Multiple submitters

Likely pathogenic 112

  • c.1715-2A>G Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • c.268+1G>A Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • c.640+1G>A Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • c.1066+1G>T Single submitter junctional epidermolysis bullosa
  • c.1285+1G>A Single submitter
  • c.1468+1G>A Single submitter epidermolysis bullosa, junctional 3B, severe
  • c.1468+1G>T Single submitter junctional epidermolysis bullosa Herlitz type
  • c.1715-1G>C Single submitter junctional epidermolysis bullosa Herlitz type
  • c.2014+1G>A Single submitter junctional epidermolysis bullosa Herlitz type
  • c.2015-1G>T Single submitter
  • c.2220+1_2220+2del Single submitter epidermolysis bullosa, junctional 3B, severe
  • c.2220+2T>C Single submitter
  • c.2601+1G>C Single submitter
  • c.2602-1G>A Single submitter
  • c.269-1G>T Single submitter
  • c.3069+1G>A Single submitter
  • c.3229-1G>A Single submitter
  • c.503+1G>C Single submitter junctional epidermolysis bullosa Herlitz type
  • c.504-51_550del Single submitter
  • c.764-1G>A Single submitter
  • c.80-2A>C Single submitter
  • c.80-2A>G Single submitter junctional epidermolysis bullosa Herlitz type
  • c.954-1G>A Single submitter
  • p.Ala374fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ala443fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ala491fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ala761fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Ala878fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ala967fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Arg917fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Arg933Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Arg95fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Asn574fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Asn59fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Asn739fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Asn901fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Asp276delinsLeuSerLeuIleIleTer Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Asp568fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Cys309Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Cys393Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Cys531fs Single submitter
  • p.Cys593Ter Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Cys65Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Cys84Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Cys96Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln1005fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gln1111Ter Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gln1151fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gln130Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln518Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln713Ter Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gln788fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln907Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln911fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gln922Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gln992Ter Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Glu335Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Glu833fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Glu905Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gly596Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gly599fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gly860Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Gly900fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Gly913fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.His285fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Leu858fs Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Lys569Ter Single submitter epidermolysis bullosa, junctional 3B, severe
  • p.Lys636fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Lys824Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Lys919Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Lys982Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Lys989Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ser471Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ser635Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ser745Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Ser791Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Trp218fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Trp5Ter Single submitter
  • p.Tyr450fs Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Tyr73Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Tyr946Ter Single submitter junctional epidermolysis bullosa Herlitz type
  • c.1468+1del No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.1714+2T>C No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.1715-1G>A No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.1857+1G>A No assertion criteria epidermolysis bullosa, junctional 3A, intermediate
  • c.1858-1G>A No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.2220+2T>G No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.2456+1G>C No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.2602-1G>C No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.3069+1G>C No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.3329-2A>G No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.504-2A>C No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.640+2T>A No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.641-2A>G No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.953+1G>A No assertion criteria junctional epidermolysis bullosa Herlitz type
  • c.954-2A>T No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Asp61Ter No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Cys187Ter No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gln1075fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gln1125fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gln1137fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gln237Ter No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gln628Ter No assertion criteria epidermolysis bullosa, junctional 3A, intermediate
  • p.Gln864Ter No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Glu657fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gly293fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Gly421fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.His847fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Leu797fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Lys1050fs No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Met1Ile No assertion criteria junctional epidermolysis bullosa Herlitz type
  • p.Ser977fs No assertion criteria junctional epidermolysis bullosa Herlitz type

Conflicting classifications of pathogenicity 41

  • c.1286-4C>T Single submitter junctional epidermolysis bullosa
  • c.2014+12C>A Single submitter junctional epidermolysis bullosa
  • c.2456+15G>A Single submitter junctional epidermolysis bullosa
  • c.503+14G>A Single submitter junctional epidermolysis bullosa
  • c.80-6C>T Single submitter junctional epidermolysis bullosa
  • c.954-15T>C Single submitter junctional epidermolysis bullosa
  • p.Ala1011= Single submitter junctional epidermolysis bullosa
  • p.Ala1091= Single submitter junctional epidermolysis bullosa
  • p.Ala200Glu Single submitter junctional epidermolysis bullosa ⚠
  • p.Ala405= Single submitter junctional epidermolysis bullosa
  • p.Ala546Asp Single submitter junctional epidermolysis bullosa Herlitz type ⚠
  • p.Ala796Val Single submitter junctional epidermolysis bullosa ⚠
  • p.Ala811Gly Single submitter Inborn genetic diseases ⚠
  • p.Ala878= Single submitter junctional epidermolysis bullosa
  • p.Arg1153= Single submitter junctional epidermolysis bullosa
  • p.Arg165Cys Single submitter amelogenesis imperfecta type 1 ⚠
  • p.Arg170Leu Single submitter Inborn genetic diseases ⚠
  • p.Arg197His Single submitter Inborn genetic diseases ⚠
  • p.Arg295Gln Single submitter junctional epidermolysis bullosa ⚠
  • p.Arg347Cys Single submitter ⚠
  • p.Arg926His Single submitter epidermolysis bullosa, junctional 3A, intermediate ⚠
  • p.Asn964= Single submitter junctional epidermolysis bullosa
  • p.Gln1082= Single submitter junctional epidermolysis bullosa
  • p.Gln1137= Single submitter junctional epidermolysis bullosa
  • p.Glu1118= Single submitter junctional epidermolysis bullosa
  • p.Glu66Lys Single submitter junctional epidermolysis bullosa
  • p.Glu957Lys Single submitter epidermolysis bullosa, junctional 3A, intermediate ⚠
  • p.Gly1104Ser Single submitter Inborn genetic diseases ⚠
  • p.Gly358= Single submitter junctional epidermolysis bullosa
  • p.Gly806= Single submitter junctional epidermolysis bullosa
  • p.Gly998= Single submitter junctional epidermolysis bullosa
  • p.Ile383Val Single submitter junctional epidermolysis bullosa ⚠
  • p.Ile440Val Single submitter junctional epidermolysis bullosa ⚠
  • p.Leu633= Single submitter junctional epidermolysis bullosa Herlitz type
  • p.Met1053Lys Single submitter junctional epidermolysis bullosa ⚠
  • p.Met1Val Single submitter epidermolysis bullosa, junctional 3A, intermediate
  • p.Pro474= Single submitter junctional epidermolysis bullosa
  • p.Pro808Leu Single submitter Inborn genetic diseases ⚠
  • p.Thr297Ala Single submitter epidermolysis bullosa, junctional 3A, intermediate ⚠
  • p.Tyr265= Single submitter junctional epidermolysis bullosa
  • p.Val480Met Single submitter Inborn genetic diseases ⚠

Benign 76

Benign/Likely benign 13

  • c.1469-18T>C Multiple submitters
  • c.2601+17T>C Multiple submitters
  • c.269-15C>T Multiple submitters junctional epidermolysis bullosa
  • c.2754+9T>C Multiple submitters junctional epidermolysis bullosa
  • p.Ala497= Multiple submitters junctional epidermolysis bullosa
  • p.Arg115Gln Multiple submitters junctional epidermolysis bullosa
  • p.Arg857Pro Multiple submitters epidermolysis bullosa, junctional 3A, intermediate
  • p.Asn912= Multiple submitters junctional epidermolysis bullosa
  • p.Asp662= Multiple submitters
  • p.Leu294= Multiple submitters junctional epidermolysis bullosa
  • p.Pro1182= Multiple submitters junctional epidermolysis bullosa
  • p.Thr1069Met Multiple submitters junctional epidermolysis bullosa
  • p.Thr990= Multiple submitters

Likely benign 623

Showing the top 300 by review status; the full set is in the sitemap.

Uncertain significance 257