LOX — 666 ClinVar variants

All ClinVar germline LOX variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 351 flagged for review →

28 Pathogenic · 13 Pathogenic/Likely pathogenic · 15 Likely pathogenic · 37 Conflicting · 11 Benign · 10 Benign/Likely benign · 192 Likely benign · 360 Uncertain significance

Full LOX gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 351

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 28

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predicted LoF vs a conflicting call 2

ClinVar submitters conflict, and it's a predicted loss-of-function change in a gene where LoF causes disease — flagged for review, not resolved (verify NMD-escape for C-terminal truncations). Non-missense.

Predictors lean, ClinVar uncertain 260

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 260

Predictors split 61

The independent predictors disagree with each other — read with care.

All LOX variants

Pathogenic 28

Pathogenic/Likely pathogenic 13

  • c.1035+1G>A Multiple submitters aortic aneurysm, familial thoracic 10
  • c.1131+1_1131+6del Multiple submitters
  • c.740+1G>T Multiple submitters
  • p.Arg118fs Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Arg281Ter Multiple submitters Cardiovascular phenotype
  • p.Arg337Ter Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Gln209fs Multiple submitters Cardiovascular phenotype
  • p.Gly202Ter Multiple submitters Cardiovascular phenotype
  • p.Met298Arg Multiple submitters familial thoracic aortic aneurysm and aortic dissection
  • p.Pro182fs Multiple submitters
  • p.Ser130Ter Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Trp42Ter Multiple submitters LOX-related disorder
  • p.Tyr227Ter Multiple submitters aortic aneurysm, familial thoracic 10

Likely pathogenic 15

Conflicting classifications of pathogenicity 37

Benign 11

Benign/Likely benign 10

  • c.631+10C>T Multiple submitters familial thoracic aortic aneurysm and aortic dissection
  • c.740+6G>A Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Arg103Pro Multiple submitters Cardiovascular phenotype
  • p.Arg68= Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Glu49= Multiple submitters Cardiovascular phenotype
  • p.Leu10= Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Pro159Gln Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Pro72= Multiple submitters Cardiovascular phenotype
  • p.Ser132Phe Multiple submitters aortic aneurysm, familial thoracic 10
  • p.Ser178= Multiple submitters aortic aneurysm, familial thoracic 10

Likely benign 192

Uncertain significance 360

Showing the top 300 by review status; the full set is in the sitemap.