MDM2 — 160 ClinVar variants

All ClinVar germline MDM2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 87 flagged for review →

1 Likely pathogenic · 2 Conflicting · 7 Benign · 56 Likely benign · 94 Uncertain significance

Full MDM2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 87

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 2

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 54

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 31

The independent predictors disagree with each other — read with care.

All MDM2 variants

Likely pathogenic 1

  • p.Ter498Gln Single submitter Accelerated tumor formation, susceptibility to

Conflicting classifications of pathogenicity 2

  • p.Leu144Pro Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser182Pro Single submitter Accelerated tumor formation, susceptibility to ⚠

Benign 7

  • c.100-10C>A Multiple submitters Accelerated tumor formation, susceptibility to
  • c.-94A>G Multiple submitters Accelerated tumor formation, susceptibility to
  • p.Glu360= Multiple submitters Accelerated tumor formation, susceptibility to
  • p.Leu203= Multiple submitters Accelerated tumor formation, susceptibility to
  • c.685-3del Single submitter Accelerated tumor formation, susceptibility to
  • c.840+14del Single submitter Accelerated tumor formation, susceptibility to
  • c.918+15A>T Single submitter Accelerated tumor formation, susceptibility to

Likely benign 56

  • p.Cys455= Multiple submitters Accelerated tumor formation, susceptibility to
  • c.100-5T>G Single submitter Accelerated tumor formation, susceptibility to
  • c.175-13A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.175-15A>T Single submitter Accelerated tumor formation, susceptibility to
  • c.175-18A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.175-7A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.309-5A>C Single submitter Accelerated tumor formation, susceptibility to
  • c.309-5A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.358+10T>G Single submitter Accelerated tumor formation, susceptibility to
  • c.359-15T>C Single submitter Accelerated tumor formation, susceptibility to
  • c.359-4T>G Single submitter Accelerated tumor formation, susceptibility to
  • c.359-8TC[2] Single submitter Accelerated tumor formation, susceptibility to
  • c.524-18T>G Single submitter Accelerated tumor formation, susceptibility to
  • c.524-20T>C Single submitter Accelerated tumor formation, susceptibility to
  • c.524-3C>T Single submitter Accelerated tumor formation, susceptibility to
  • c.524-8A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.684+19G>A Single submitter Accelerated tumor formation, susceptibility to
  • c.684+20T>C Single submitter Accelerated tumor formation, susceptibility to
  • c.685-18A>T Single submitter Accelerated tumor formation, susceptibility to
  • c.685-20A>T Single submitter Accelerated tumor formation, susceptibility to
  • c.840+14T>C Single submitter Accelerated tumor formation, susceptibility to
  • c.840+6dup Single submitter Accelerated tumor formation, susceptibility to
  • c.841-16G>T Single submitter Accelerated tumor formation, susceptibility to
  • c.918+10C>T Single submitter Accelerated tumor formation, susceptibility to
  • c.919-11T>C Single submitter Accelerated tumor formation, susceptibility to
  • p.Asn131= Single submitter Accelerated tumor formation, susceptibility to
  • p.Asn334= Single submitter Accelerated tumor formation, susceptibility to
  • p.Asp261= Single submitter Accelerated tumor formation, susceptibility to
  • p.Asp264= Single submitter Accelerated tumor formation, susceptibility to
  • p.Asp416= Single submitter Accelerated tumor formation, susceptibility to
  • p.Asp52= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gln149= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gln272= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gln288= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gln393= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gln78= Single submitter Accelerated tumor formation, susceptibility to
  • p.Glu150= Single submitter Accelerated tumor formation, susceptibility to
  • p.Gly93= Single submitter Accelerated tumor formation, susceptibility to
  • p.Ile456= Single submitter Accelerated tumor formation, susceptibility to
  • p.Leu205= Single submitter Accelerated tumor formation, susceptibility to
  • p.Leu242= Single submitter Accelerated tumor formation, susceptibility to
  • p.Leu260= Single submitter Accelerated tumor formation, susceptibility to
  • p.Leu88= Single submitter Accelerated tumor formation, susceptibility to
  • p.Pro320= Single submitter Accelerated tumor formation, susceptibility to
  • p.Pro337= Single submitter Accelerated tumor formation, susceptibility to
  • p.Pro38= Single submitter Accelerated tumor formation, susceptibility to
  • p.Pro497= Single submitter Accelerated tumor formation, susceptibility to
  • p.Ser122= Single submitter Accelerated tumor formation, susceptibility to
  • p.Ser124= Single submitter Accelerated tumor formation, susceptibility to
  • p.Ser259= Single submitter Accelerated tumor formation, susceptibility to
  • p.Thr126= Single submitter Accelerated tumor formation, susceptibility to
  • p.Thr224= Single submitter Accelerated tumor formation, susceptibility to
  • p.Tyr495= Single submitter Accelerated tumor formation, susceptibility to
  • p.Tyr54= Single submitter Accelerated tumor formation, susceptibility to
  • p.Val286= Single submitter Accelerated tumor formation, susceptibility to
  • p.Val81= Single submitter Accelerated tumor formation, susceptibility to

Uncertain significance 94

  • c.523+5A>G Multiple submitters Accelerated tumor formation, susceptibility to
  • p.Ala289Thr Multiple submitters lessel-kubisch syndrome ⚠
  • p.Arg332His Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Asn117Ser Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Asn374Ser Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Gln414Leu Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Glu273Ala Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Gly341Glu Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Ser122Leu Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Ser397Asn Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Thr469Ser Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • p.Tyr411Cys Multiple submitters Accelerated tumor formation, susceptibility to ⚠
  • c.174+18A>G Single submitter Accelerated tumor formation, susceptibility to
  • c.524-2A>G Single submitter Accelerated tumor formation, susceptibility to
  • p.Ala232Ser Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ala306= Single submitter Accelerated tumor formation, susceptibility to
  • p.Arg103= Single submitter Accelerated tumor formation, susceptibility to
  • p.Arg187Thr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg189Cys Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg189His Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg209Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg215Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg327Thr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Arg71Gln Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asn334Lys Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asn384Ser Single submitter lessel-kubisch syndrome ⚠
  • p.Asn384Tyr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asp140Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asp179Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asp200Asn Single submitter lessel-kubisch syndrome ⚠
  • p.Asp261Asn Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asp300Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Asp307Asn Single submitter ⚠
  • p.Asp52His Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Cys133Tyr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Cys368Tyr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Gln141Glu Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Gln272Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Gln358Pro Single submitter ⚠
  • p.Gln414His Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu101Gln Single submitter ⚠
  • p.Glu316Asp Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu333Asp Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu354Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu360Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu383Ala Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Glu421Lys Single submitter ⚠
  • p.Glu423Gln Single submitter ⚠
  • p.Glu429fs Single submitter Accelerated tumor formation, susceptibility to
  • p.Glu430Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Gly233del Single submitter Accelerated tumor formation, susceptibility to
  • p.His102Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.His190Tyr Single submitter ⚠
  • p.His324Leu Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ile195Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ile211Leu Single submitter ⚠
  • p.Ile211Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ile25Thr Single submitter lessel-kubisch syndrome ⚠
  • p.Ile347Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ile372Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu135Phe Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu148Pro Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu197Phe Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu205Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu274Pro Single submitter ⚠
  • p.Leu305Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu321Phe Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu331Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Leu60Val Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Lys344Glu Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Lys387Asn Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Lys76Gln Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Pro228Leu Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Pro319Thr Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Pro437Ser Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Pro482= Single submitter Accelerated tumor formation, susceptibility to
  • p.Ser129Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser178Leu Single submitter ⚠
  • p.Ser194Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser218Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser296Ala Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser304Pro Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser397Arg Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser401Cys Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser401Phe Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser407Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser413Gly Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser434Cys Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Ser435Asn Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Thr126Ile Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Thr357Lys Single submitter ⚠
  • p.Tyr62Phe Single submitter Accelerated tumor formation, susceptibility to ⚠
  • p.Val286fs Single submitter
  • p.Val59Ile Single submitter ⚠