MRPS22 — 216 ClinVar variants
All ClinVar germline MRPS22 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 88 flagged for review →
12 Pathogenic · 2 Pathogenic/Likely pathogenic · 6 Likely pathogenic · 12 Conflicting · 24 Benign · 6 Benign/Likely benign · 57 Likely benign · 97 Uncertain significance
Full MRPS22 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 88
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 3
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
MRPS22 p.Arg256His
Conflicting
Single submitter
Inborn genetic diseases
-
MRPS22 p.Thr206Ile
Conflicting
Single submitter
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Arg135Gln
Conflicting
No assertion criteria
ovarian dysgenesis 7
Predictors lean, ClinVar uncertain 63
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
MRPS22 p.Arg125Gln
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Arg175Gly
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Arg182Cys
Uncertain significance
Multiple submitters
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Arg202Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Asp295Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Gln290Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Leu4Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Met218Val
Uncertain significance
Multiple submitters
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Met46Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
- MRPS22 p.Phe70Leu Uncertain significance Multiple submitters
-
MRPS22 p.Pro101Leu
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Thr348Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
- MRPS22 p.Tyr267His Uncertain significance Multiple submitters
- MRPS22 p.Ala233Val Uncertain significance Single submitter
-
MRPS22 p.Arg15Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Arg170Cys
Uncertain significance
Single submitter
hepatoencephalopathy due to combined oxidative phosphorylation defect type 1
- MRPS22 p.Arg189Leu Uncertain significance Single submitter
- MRPS22 p.Arg189Trp Uncertain significance Single submitter
- MRPS22 p.Arg355His Uncertain significance Single submitter
-
MRPS22 p.Asn299Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Asp145Tyr
Uncertain significance
Single submitter
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Asp160Val
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Asp222Asn Uncertain significance Single submitter
- MRPS22 p.Asp238His Uncertain significance Single submitter
-
MRPS22 p.Gln221Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Gln221His
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Gln290Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Gln302His
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Gln312His Uncertain significance Single submitter
- MRPS22 p.Gln320Glu Uncertain significance Single submitter
-
MRPS22 p.Gln320His
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Gln88Arg
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Glu149Lys Uncertain significance Single submitter
-
MRPS22 p.Glu200Asp
Uncertain significance
Single submitter
hypotonia with lactic acidemia and hyperammonemia
- MRPS22 p.Glu323Asp Uncertain significance Single submitter
-
MRPS22 p.Gly179Asp
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Ile165Val Uncertain significance Single submitter
- MRPS22 p.Ile208Val Uncertain significance Single submitter
-
MRPS22 p.Ile209Val
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Ile289Phe Uncertain significance Single submitter
- MRPS22 p.Ile342Thr Uncertain significance Single submitter
- MRPS22 p.Ile78Leu Uncertain significance Single submitter
- MRPS22 p.Ile78Val Uncertain significance Single submitter
- MRPS22 p.Ile95Val Uncertain significance Single submitter
-
MRPS22 p.Leu261Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Leu307Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Leu85Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Lys338Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Met106Ile
Uncertain significance
Single submitter
hypotonia with lactic acidemia and hyperammonemia
- MRPS22 p.Met71Ile Uncertain significance Single submitter
-
MRPS22 p.Phe232Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Pro177Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Pro177Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Pro198Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Pro207Leu Uncertain significance Single submitter
-
MRPS22 p.Ser354Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Thr102Asn
Uncertain significance
Single submitter
hypotonia with lactic acidemia and hyperammonemia
- MRPS22 p.Thr217Ser Uncertain significance Single submitter
-
MRPS22 p.Thr6Ala
Uncertain significance
Single submitter
ovarian dysgenesis 7
-
MRPS22 p.Thr7Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Tyr242Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Tyr349Asn
Uncertain significance
Single submitter
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Val8Leu
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 22
The independent predictors disagree with each other — read with care.
-
MRPS22 p.Arg256Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Arg263Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Asp226Gly
Uncertain significance
Multiple submitters
mitochondrial disease
- MRPS22 p.Glu152Gly Uncertain significance Multiple submitters
-
MRPS22 p.Ile253Thr
Uncertain significance
Multiple submitters
ovarian dysgenesis 7
-
MRPS22 p.Thr83Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Val174Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
MRPS22 p.Ala297Gly
Uncertain significance
Single submitter
Inborn genetic diseases
- MRPS22 p.Arg168Gln Uncertain significance Single submitter
-
MRPS22 p.Arg168Trp
Conflicting
Single submitter
hypotonia with lactic acidemia and hyperammonemia
- MRPS22 p.Arg191Gln Uncertain significance Single submitter
-
MRPS22 p.Arg202His
Conflicting
Single submitter
muscular dystrophy, adult-onset, with leukoencephalopathy
-
MRPS22 p.Arg355Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Gln76Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Glu213Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.His167Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Leu262Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Met192Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Ser313Leu
Conflicting
Single submitter
hypotonia with lactic acidemia and hyperammonemia
-
MRPS22 p.Thr153Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Tyr219His
Uncertain significance
Single submitter
Inborn genetic diseases
-
MRPS22 p.Val330Gly
Uncertain significance
Single submitter
Inborn genetic diseases
All MRPS22 variants
Pathogenic 12
- c.878+1G>T Multiple submitters 46 XX gonadal dysgenesis
- p.Arg125Ter Multiple submitters Inborn genetic diseases
- p.Ala317fs Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Arg182fs Single submitter
- p.Arg191Ter Single submitter
- p.Asp254fs Single submitter
- p.Gly257fs Single submitter
- p.Leu14fs Single submitter
- p.Trp11Ter Single submitter
- p.Tyr163Ter Single submitter Inborn genetic diseases
- c.648+1G>T No assertion criteria hypotonia with lactic acidemia and hyperammonemia
- p.Leu215Pro No assertion criteria hypotonia with lactic acidemia and hyperammonemia
Pathogenic/Likely pathogenic 2
- p.Arg170His Multiple submitters ovarian dysgenesis 7
- p.Asp292fs Multiple submitters hypotonia with lactic acidemia and hyperammonemia
Likely pathogenic 6
- c.649-2A>G Single submitter
- p.Arg135Ter Single submitter
- p.Ile161fs Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Phe331fs Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Ser313Ter Single submitter
- p.Tyr250Ter Single submitter
Conflicting classifications of pathogenicity 12
- c.172+7G>T Single submitter hypotonia with lactic acidemia and hyperammonemia
- c.340-14T>A Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Ala109= Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Ala2= Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Arg168Trp Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Arg202His Single submitter muscular dystrophy, adult-onset, with leukoencephalopathy ⚠
- p.Arg256His Single submitter Inborn genetic diseases ⚠
- p.Gln30= Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Leu346fs Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Ser313Leu Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Thr206Ile Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Arg135Gln No assertion criteria ovarian dysgenesis 7 ⚠
Benign 24
- c.339+102C>T Multiple submitters
- c.340-100A>T Multiple submitters
- c.504+217A>G Multiple submitters
- c.504+92C>T Multiple submitters
- c.649-126C>A Multiple submitters
- c.649-249G>A Multiple submitters
- c.649-250T>C Multiple submitters
- c.649-302C>A Multiple submitters
- c.732+210A>G Multiple submitters
- c.733-262C>G Multiple submitters
- c.987+205T>G Multiple submitters
- c.988-117C>A Multiple submitters
- c.988-33A>G Multiple submitters
- c.*82C>T Multiple submitters
- c.*93A>G Multiple submitters
- p.Ile95Leu Multiple submitters hypotonia with lactic acidemia and hyperammonemia
- c.173-291G>A Single submitter
- c.339+175A>G Single submitter
- c.648+19del Single submitter
- c.649-295del Single submitter
- c.879-238T>C Single submitter
- c.879-330T>A Single submitter
- c.987+167T>C Single submitter
- c.988-157_988-154del Single submitter
Benign/Likely benign 6
- c.173-15_173-14dup Multiple submitters
- c.987+15dup Multiple submitters
- p.His247Gln Multiple submitters hypotonia with lactic acidemia and hyperammonemia
- p.Leu9Phe Multiple submitters
- p.Lys67= Multiple submitters hypotonia with lactic acidemia and hyperammonemia
- p.Thr107= Multiple submitters
Likely benign 57
- c.173-14A>G Multiple submitters
- c.505-41G>A Multiple submitters
- c.987+15del Multiple submitters
- p.Pro31= Multiple submitters
- c.173-18T>C Single submitter
- c.339+11G>T Single submitter
- c.339+290C>T Single submitter
- c.339+4C>T Single submitter
- c.340-18_340-15del Single submitter
- c.340-72T>C Single submitter
- c.504+18C>T Single submitter
- c.504+19G>A Single submitter
- c.648+16T>A Single submitter
- c.732+13T>G Single submitter
- c.732+14A>C Single submitter
- c.733-8G>A Single submitter
- c.878+12C>G Single submitter
- c.878+18_878+21del Single submitter
- c.879-15C>A Single submitter
- c.879-15C>T Single submitter
- c.879-6T>G Single submitter
- c.987+12T>G Single submitter
- c.987+173_987+174del Single submitter
- c.987+9T>C Single submitter
- c.988-113T>A Single submitter
- c.988-13T>C Single submitter
- c.988-170TG[2] Single submitter
- c.988-19_988-18del Single submitter
- c.988-5_988-4dup Single submitter
- c.-42dupA Single submitter
- c.*18A>G Single submitter
- p.Ala118= Single submitter
- p.Ala121= Single submitter
- p.Ala321= Single submitter
- p.Asp222= Single submitter
- p.Glu74= Single submitter
- p.Gly5= Single submitter
- p.His305= Single submitter
- p.Ile193= Single submitter
- p.Leu126= Single submitter
- p.Leu14= Single submitter
- p.Leu228= Single submitter
- p.Leu344= Single submitter
- p.Leu4= Single submitter
- p.Leu9Trp Single submitter
- p.Ser12= Single submitter
- p.Thr180= Single submitter
- p.Thr7= Single submitter
- p.Tyr156= Single submitter
- p.Tyr250= Single submitter
- p.Val157= Single submitter
- p.Val173= Single submitter
- p.Val306Met Single submitter Inborn genetic diseases
- c.172+476C>T No assertion criteria MRPS22-related disorder
- c.505-7del No assertion criteria MRPS22-related disorder
- c.648+6G>A No assertion criteria MRPS22-related disorder
- c.879-3C>T No assertion criteria MRPS22-related disorder
Uncertain significance 97
- p.Arg125Gln Multiple submitters Inborn genetic diseases ⚠
- p.Arg15del Multiple submitters Inborn genetic diseases
- p.Arg175Gly Multiple submitters Inborn genetic diseases ⚠
- p.Arg182Cys Multiple submitters hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Arg202Cys Multiple submitters Inborn genetic diseases ⚠
- p.Arg256Cys Multiple submitters Inborn genetic diseases ⚠
- p.Arg263Cys Multiple submitters Inborn genetic diseases ⚠
- p.Asp226Gly Multiple submitters mitochondrial disease ⚠
- p.Asp295Asn Multiple submitters Inborn genetic diseases ⚠
- p.Gln290Arg Multiple submitters Inborn genetic diseases ⚠
- p.Glu152Gly Multiple submitters ⚠
- p.Ile253Thr Multiple submitters ovarian dysgenesis 7 ⚠
- p.Leu4Phe Multiple submitters Inborn genetic diseases ⚠
- p.Lys244= Multiple submitters hypotonia with lactic acidemia and hyperammonemia
- p.Met218Val Multiple submitters hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Met46Thr Multiple submitters Inborn genetic diseases ⚠
- p.Phe70Leu Multiple submitters ⚠
- p.Pro101Leu Multiple submitters Inborn genetic diseases ⚠
- p.Thr348Ile Multiple submitters Inborn genetic diseases ⚠
- p.Thr83Arg Multiple submitters Inborn genetic diseases ⚠
- p.Tyr267His Multiple submitters ⚠
- p.Val174Ile Multiple submitters Inborn genetic diseases ⚠
- c.172+522T>C Single submitter hypotonia with lactic acidemia and hyperammonemia
- c.339+5G>A Single submitter Inborn genetic diseases
- c.878+13T>C Single submitter hypotonia with lactic acidemia and hyperammonemia
- c.878+2dup Single submitter
- c.987+3A>G Single submitter
- c.988-5_988-2dup Single submitter
- p.Ala233Val Single submitter ⚠
- p.Ala297Gly Single submitter Inborn genetic diseases ⚠
- p.Ala57= Single submitter
- p.Arg15Gly Single submitter Inborn genetic diseases ⚠
- p.Arg168Gln Single submitter ⚠
- p.Arg170Cys Single submitter hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 ⚠
- p.Arg189Leu Single submitter ⚠
- p.Arg189Trp Single submitter ⚠
- p.Arg191Gln Single submitter ⚠
- p.Arg355Cys Single submitter Inborn genetic diseases ⚠
- p.Arg355His Single submitter ⚠
- p.Asn299Thr Single submitter Inborn genetic diseases ⚠
- p.Asp145Tyr Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Asp160Val Single submitter Inborn genetic diseases ⚠
- p.Asp222Asn Single submitter ⚠
- p.Asp238His Single submitter ⚠
- p.Asp319fs Single submitter Inborn genetic diseases
- p.Gln221Arg Single submitter Inborn genetic diseases ⚠
- p.Gln221His Single submitter Inborn genetic diseases ⚠
- p.Gln290Glu Single submitter Inborn genetic diseases ⚠
- p.Gln302His Single submitter Inborn genetic diseases ⚠
- p.Gln312His Single submitter ⚠
- p.Gln315Ter Single submitter hypotonia with lactic acidemia and hyperammonemia
- p.Gln320Glu Single submitter ⚠
- p.Gln320His Single submitter Inborn genetic diseases ⚠
- p.Gln76Arg Single submitter Inborn genetic diseases ⚠
- p.Gln88Arg Single submitter Inborn genetic diseases ⚠
- p.Glu149Lys Single submitter ⚠
- p.Glu200Asp Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Glu213Gly Single submitter Inborn genetic diseases ⚠
- p.Glu323Asp Single submitter ⚠
- p.Gly179Asp Single submitter Inborn genetic diseases ⚠
- p.His167Gln Single submitter Inborn genetic diseases ⚠
- p.His305_Val306del Single submitter
- p.Ile165Val Single submitter ⚠
- p.Ile208Val Single submitter ⚠
- p.Ile209Val Single submitter Inborn genetic diseases ⚠
- p.Ile289Phe Single submitter ⚠
- p.Ile342Thr Single submitter ⚠
- p.Ile78Leu Single submitter ⚠
- p.Ile78Val Single submitter ⚠
- p.Ile95Val Single submitter ⚠
- p.Leu261Val Single submitter Inborn genetic diseases ⚠
- p.Leu262Val Single submitter Inborn genetic diseases ⚠
- p.Leu307Val Single submitter Inborn genetic diseases ⚠
- p.Leu344fs Single submitter
- p.Leu85Phe Single submitter Inborn genetic diseases ⚠
- p.Lys338Asn Single submitter Inborn genetic diseases ⚠
- p.Met106Ile Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Met192Val Single submitter Inborn genetic diseases ⚠
- p.Met71Ile Single submitter ⚠
- p.Phe232Leu Single submitter Inborn genetic diseases ⚠
- p.Pro177Ala Single submitter Inborn genetic diseases ⚠
- p.Pro177Thr Single submitter Inborn genetic diseases ⚠
- p.Pro198Ser Single submitter Inborn genetic diseases ⚠
- p.Pro207Leu Single submitter ⚠
- p.Ser354Gly Single submitter Inborn genetic diseases ⚠
- p.Thr102Asn Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Thr153Pro Single submitter Inborn genetic diseases ⚠
- p.Thr217Ser Single submitter ⚠
- p.Thr6Ala Single submitter ovarian dysgenesis 7 ⚠
- p.Thr7Ile Single submitter Inborn genetic diseases ⚠
- p.Tyr219His Single submitter Inborn genetic diseases ⚠
- p.Tyr242Ser Single submitter Inborn genetic diseases ⚠
- p.Tyr349Asn Single submitter hypotonia with lactic acidemia and hyperammonemia ⚠
- p.Tyr349Ter Single submitter Inborn genetic diseases
- p.Val272Leu Single submitter Inborn genetic diseases
- p.Val330Gly Single submitter Inborn genetic diseases ⚠
- p.Val8Leu Single submitter Inborn genetic diseases ⚠