ODAD2 — 709 ClinVar variants

All ClinVar germline ODAD2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 275 flagged for review →

35 Pathogenic · 9 Pathogenic/Likely pathogenic · 25 Likely pathogenic · 15 Conflicting · 54 Benign · 26 Benign/Likely benign · 256 Likely benign · 289 Uncertain significance

Full ODAD2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 275

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 11

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 210

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 210

Predictors split 54

The independent predictors disagree with each other — read with care.

All ODAD2 variants

Pathogenic 35

  • c.2495+1G>A Multiple submitters primary ciliary dyskinesia 23
  • p.Arg286fs Multiple submitters primary ciliary dyskinesia 23
  • p.Gln657Ter Multiple submitters primary ciliary dyskinesia 23
  • p.Glu557Ter Multiple submitters ARMC4-related disorders
  • p.Glu658Ter Multiple submitters primary ciliary dyskinesia 23
  • p.Glu672Ter Multiple submitters Fetal anomalies with a likely genetic cause
  • p.Glu83Ter Multiple submitters primary ciliary dyskinesia 23
  • p.Leu802_Val803insTer Multiple submitters primary ciliary dyskinesia 23
  • p.Ser892Ter Multiple submitters primary ciliary dyskinesia 23
  • c.382+995_936+335del Single submitter primary ciliary dyskinesia 23
  • p.Ala734fs Single submitter primary ciliary dyskinesia 23
  • p.Arg790Ter Single submitter primary ciliary dyskinesia 23
  • p.Asn914_Leu915insTer Single submitter primary ciliary dyskinesia 23
  • p.Asn914fs Single submitter primary ciliary dyskinesia 23
  • p.Asn936fs Single submitter primary ciliary dyskinesia 23
  • p.Cys261fs Single submitter primary ciliary dyskinesia 23
  • p.Cys486Ter Single submitter primary ciliary dyskinesia 23
  • p.Cys949fs Single submitter primary ciliary dyskinesia 23
  • p.Gln106Ter Single submitter primary ciliary dyskinesia 23
  • p.Gln242Ter Single submitter primary ciliary dyskinesia 23
  • p.His189fs Single submitter primary ciliary dyskinesia 23
  • p.Ile113fs Single submitter primary ciliary dyskinesia
  • p.Ile517fs Single submitter primary ciliary dyskinesia 23
  • p.Ile905fs Single submitter primary ciliary dyskinesia 23
  • p.Leu119fs Single submitter primary ciliary dyskinesia 23
  • p.Leu260fs Single submitter primary ciliary dyskinesia 23
  • p.Lys549fs Single submitter primary ciliary dyskinesia 23
  • p.Pro132fs Single submitter primary ciliary dyskinesia
  • p.Ser289Ter Single submitter primary ciliary dyskinesia 23
  • p.Ser428Ter Single submitter
  • p.Thr263fs Single submitter primary ciliary dyskinesia 23
  • p.Thr296fs Single submitter primary ciliary dyskinesia 23
  • p.Thr422_Val423insTer Single submitter primary ciliary dyskinesia 23
  • p.Tyr971fs Single submitter primary ciliary dyskinesia 23
  • p.Arg109fs No assertion criteria primary ciliary dyskinesia

Pathogenic/Likely pathogenic 9

  • c.2097+1G>A Multiple submitters primary ciliary dyskinesia 23
  • c.2097+1G>T Multiple submitters primary ciliary dyskinesia
  • c.2800-2A>G Multiple submitters primary ciliary dyskinesia 23
  • p.Glu335Ter Multiple submitters ARMC4-related disorders
  • p.Leu927Trp Multiple submitters primary ciliary dyskinesia 23
  • p.Ser475Ter Multiple submitters ARMC4-related disorders
  • p.Trp359Ter Multiple submitters ODAD2-related disorder
  • p.Trp740Ter Multiple submitters primary ciliary dyskinesia 23
  • p.Tyr698fs Multiple submitters Fetal anomalies with a likely genetic cause

Likely pathogenic 25

Conflicting classifications of pathogenicity 15

Benign 54

Benign/Likely benign 26

  • c.1533+13G>C Multiple submitters primary ciliary dyskinesia 23
  • c.1534-18dup Multiple submitters primary ciliary dyskinesia 23
  • c.1534-19C>G Multiple submitters primary ciliary dyskinesia 23
  • c.2253-13A>T Multiple submitters primary ciliary dyskinesia 23
  • c.2253-20C>T Multiple submitters primary ciliary dyskinesia 23
  • c.2496-12G>T Multiple submitters primary ciliary dyskinesia 23
  • c.2610+11A>G Multiple submitters primary ciliary dyskinesia 23
  • c.383-19_383-18dup Multiple submitters
  • c.383-19dup Multiple submitters primary ciliary dyskinesia 23
  • c.383-6del Multiple submitters primary ciliary dyskinesia 23
  • c.383-7_383-6del Multiple submitters
  • p.Ala416= Multiple submitters primary ciliary dyskinesia
  • p.Ala994= Multiple submitters primary ciliary dyskinesia 23
  • p.Arg666Gln Multiple submitters primary ciliary dyskinesia ⚠
  • p.Arg666Pro Multiple submitters primary ciliary dyskinesia
  • p.Arg787Cys Multiple submitters primary ciliary dyskinesia ⚠
  • p.Asp204Glu Multiple submitters primary ciliary dyskinesia 23
  • p.Asp425Tyr Multiple submitters primary ciliary dyskinesia
  • p.Asp993= Multiple submitters primary ciliary dyskinesia 23
  • p.Asp995Asn Multiple submitters primary ciliary dyskinesia 23
  • p.Leu339= Multiple submitters primary ciliary dyskinesia 23
  • p.Leu709= Multiple submitters primary ciliary dyskinesia 23
  • p.Lys332Arg Multiple submitters primary ciliary dyskinesia 23
  • p.Lys552Gln Multiple submitters primary ciliary dyskinesia
  • p.Thr9= Multiple submitters primary ciliary dyskinesia 23
  • p.Tyr141= Multiple submitters primary ciliary dyskinesia 23

Likely benign 256

  • c.1142+101A>G Multiple submitters
  • c.1142+93G>A Multiple submitters
  • c.1239-13T>A Multiple submitters primary ciliary dyskinesia 23
  • c.1386+11T>C Multiple submitters primary ciliary dyskinesia 23
  • c.1386+14A>G Multiple submitters primary ciliary dyskinesia 23
  • c.1533+12T>C Multiple submitters primary ciliary dyskinesia 23
  • c.1533+41A>T Multiple submitters
  • c.1533+85C>T Multiple submitters
  • c.1534-12T>C Multiple submitters primary ciliary dyskinesia 23
  • c.1986+13G>T Multiple submitters primary ciliary dyskinesia 23
  • c.1987-36T>C Multiple submitters
  • c.2097+107A>G Multiple submitters
  • c.225-73A>G Multiple submitters
  • c.2496-7A>G Multiple submitters primary ciliary dyskinesia 23
  • c.2610+8C>G Multiple submitters primary ciliary dyskinesia 23
  • c.2800-35A>G Multiple submitters
  • c.2800-6G>T Multiple submitters primary ciliary dyskinesia 23
  • c.383-19_383-17dup Multiple submitters
  • c.683-18C>G Multiple submitters primary ciliary dyskinesia 23
  • c.819+52C>T Multiple submitters
  • p.Ala614= Multiple submitters primary ciliary dyskinesia
  • p.Ala757= Multiple submitters primary ciliary dyskinesia
  • p.Ala982= Multiple submitters primary ciliary dyskinesia 23
  • p.Arg130= Multiple submitters primary ciliary dyskinesia 23
  • p.Arg244His Multiple submitters primary ciliary dyskinesia
  • p.Asn677= Multiple submitters primary ciliary dyskinesia 23
  • p.Asn748= Multiple submitters primary ciliary dyskinesia 23
  • p.Asn978= Multiple submitters primary ciliary dyskinesia
  • p.Asp281= Multiple submitters primary ciliary dyskinesia 23
  • p.Cys693= Multiple submitters primary ciliary dyskinesia 23
  • p.Gln320= Multiple submitters primary ciliary dyskinesia 23
  • p.Gln410Glu Multiple submitters primary ciliary dyskinesia 23
  • p.Gln487Leu Multiple submitters primary ciliary dyskinesia 23
  • p.Glu206= Multiple submitters primary ciliary dyskinesia
  • p.Glu224= Multiple submitters primary ciliary dyskinesia 23
  • p.Glu730= Multiple submitters primary ciliary dyskinesia 23
  • p.His255= Multiple submitters primary ciliary dyskinesia 23
  • p.His406= Multiple submitters primary ciliary dyskinesia 23
  • p.Ile559= Multiple submitters primary ciliary dyskinesia 23
  • p.Ile758= Multiple submitters primary ciliary dyskinesia 23
  • p.Leu178= Multiple submitters primary ciliary dyskinesia
  • p.Lys156= Multiple submitters primary ciliary dyskinesia 23
  • p.Lys717= Multiple submitters primary ciliary dyskinesia 23
  • p.Pro864= Multiple submitters primary ciliary dyskinesia 23
  • p.Ser195Cys Multiple submitters primary ciliary dyskinesia 23
  • p.Ser403Thr Multiple submitters primary ciliary dyskinesia 23
  • p.Ser449= Multiple submitters primary ciliary dyskinesia 23
  • p.Ser597= Multiple submitters primary ciliary dyskinesia 23
  • p.Ser857= Multiple submitters primary ciliary dyskinesia
  • p.Thr364= Multiple submitters primary ciliary dyskinesia 23
  • p.Thr375= Multiple submitters primary ciliary dyskinesia 23
  • p.Thr422= Multiple submitters primary ciliary dyskinesia 23
  • p.Thr623= Multiple submitters primary ciliary dyskinesia 23
  • p.Thr736= Multiple submitters primary ciliary dyskinesia 23
  • p.Tyr451= Multiple submitters primary ciliary dyskinesia 23
  • p.Val126= Multiple submitters primary ciliary dyskinesia 23
  • p.Val219= Multiple submitters primary ciliary dyskinesia 23
  • p.Val269= Multiple submitters primary ciliary dyskinesia
  • c.1142+11A>G Single submitter primary ciliary dyskinesia 23
  • c.1142+15G>A Single submitter primary ciliary dyskinesia 23
  • c.1142+7A>T Single submitter primary ciliary dyskinesia 23
  • c.1142+89GTTT[4] Single submitter
  • c.1142+93_1142+104del Single submitter
  • c.1142+93_1142+108del Single submitter
  • c.1142+97_1142+104del Single submitter
  • c.1238+44A>C Single submitter
  • c.1239-14G>A Single submitter primary ciliary dyskinesia 23
  • c.1386+17del Single submitter primary ciliary dyskinesia 23
  • c.1386+19A>G Single submitter primary ciliary dyskinesia 23
  • c.1387-10A>G Single submitter primary ciliary dyskinesia 23
  • c.1387-15A>G Single submitter primary ciliary dyskinesia 23
  • c.1387-17G>C Single submitter primary ciliary dyskinesia 23
  • c.1387-4G>A Single submitter primary ciliary dyskinesia 23
  • c.1387-4G>T Single submitter primary ciliary dyskinesia 23
  • c.1533+106A>G Single submitter
  • c.1533+10T>A Single submitter primary ciliary dyskinesia 23
  • c.1534-20T>C Single submitter primary ciliary dyskinesia 23
  • c.1743+10C>T Single submitter primary ciliary dyskinesia 23
  • c.1744-10A>G Single submitter primary ciliary dyskinesia 23
  • c.1744-19G>A Single submitter primary ciliary dyskinesia 23
  • c.1986+10C>G Single submitter primary ciliary dyskinesia 23
  • c.1986+11C>T Single submitter primary ciliary dyskinesia 23
  • c.1986+16C>T Single submitter primary ciliary dyskinesia 23
  • c.1987-16A>C Single submitter primary ciliary dyskinesia 23
  • c.1987-174C>T Single submitter
  • c.1987-19T>A Single submitter primary ciliary dyskinesia 23
  • c.1987-19T>C Single submitter primary ciliary dyskinesia 23
  • c.1987-4C>T Single submitter primary ciliary dyskinesia 23
  • c.2097+20C>T Single submitter primary ciliary dyskinesia 23
  • c.2097+8G>A Single submitter primary ciliary dyskinesia 23
  • c.2098-186del Single submitter
  • c.2098-6G>A Single submitter primary ciliary dyskinesia 23
  • c.2098-7C>G Single submitter primary ciliary dyskinesia 23
  • c.2098-7C>T Single submitter primary ciliary dyskinesia 23
  • c.2098-8T>C Single submitter primary ciliary dyskinesia 23
  • c.225-15A>G Single submitter primary ciliary dyskinesia 23
  • c.225-16T>C Single submitter primary ciliary dyskinesia 23
  • c.2252+11G>T Single submitter primary ciliary dyskinesia 23
  • c.2252+18A>G Single submitter primary ciliary dyskinesia 23
  • c.2252+18del Single submitter primary ciliary dyskinesia 23
  • c.2252+19T>A Single submitter primary ciliary dyskinesia 23
  • c.2252+202G>C Single submitter
  • c.2252+9A>G Single submitter primary ciliary dyskinesia 23
  • c.2253-12T>C Single submitter primary ciliary dyskinesia 23
  • c.2253-14dup Single submitter primary ciliary dyskinesia 23
  • c.2495+225C>T Single submitter
  • c.2495+243A>G Single submitter
  • c.2496-112del Single submitter
  • c.2496-15T>C Single submitter primary ciliary dyskinesia 23
  • c.2496-15T>G Single submitter primary ciliary dyskinesia 23
  • c.2496-18T>A Single submitter primary ciliary dyskinesia 23
  • c.2496-5G>A Single submitter primary ciliary dyskinesia 23
  • c.2610+19T>C Single submitter primary ciliary dyskinesia 23
  • c.2610+8C>T Single submitter primary ciliary dyskinesia 23
  • c.2610+9G>A Single submitter primary ciliary dyskinesia 23
  • c.2611-5T>C Single submitter primary ciliary dyskinesia 23
  • c.2799+10A>G Single submitter primary ciliary dyskinesia 23
  • c.2799+293A>T Single submitter
  • c.2799+8A>G Single submitter primary ciliary dyskinesia 23
  • c.2800-10C>T Single submitter primary ciliary dyskinesia 23
  • c.3021+18T>C Single submitter primary ciliary dyskinesia 23
  • c.3021+7303C>T Single submitter
  • c.3022-21_3022-19del Single submitter primary ciliary dyskinesia 23
  • c.3022-9G>A Single submitter primary ciliary dyskinesia 23
  • c.382+13C>T Single submitter primary ciliary dyskinesia 23
  • c.382+14T>C Single submitter primary ciliary dyskinesia 23
  • c.382+17A>C Single submitter primary ciliary dyskinesia 23
  • c.382+7T>C Single submitter primary ciliary dyskinesia 23
  • c.383-14T>C Single submitter primary ciliary dyskinesia 23
  • c.383-5G>T Single submitter primary ciliary dyskinesia 23
  • c.383-64_383-63insAATTA Single submitter
  • c.383-9T>A Single submitter primary ciliary dyskinesia 23
  • c.575+8T>G Single submitter primary ciliary dyskinesia 23
  • c.576-143T>G Single submitter
  • c.576-291G>A Single submitter
  • c.682+18G>A Single submitter primary ciliary dyskinesia 23
  • c.682+18G>C Single submitter primary ciliary dyskinesia 23
  • c.819+15A>G Single submitter primary ciliary dyskinesia 23
  • c.819+19A>C Single submitter primary ciliary dyskinesia 23
  • c.819+20C>T Single submitter primary ciliary dyskinesia 23
  • c.819+8A>C Single submitter primary ciliary dyskinesia 23
  • c.820-20A>C Single submitter primary ciliary dyskinesia 23
  • c.820-6C>T Single submitter primary ciliary dyskinesia 23
  • c.820-8T>G Single submitter primary ciliary dyskinesia 23
  • c.936+118dup Single submitter
  • c.937-7A>G Single submitter primary ciliary dyskinesia 23
  • p.Ala14= Single submitter primary ciliary dyskinesia 23
  • p.Ala266= Single submitter primary ciliary dyskinesia 23
  • p.Ala330= Single submitter primary ciliary dyskinesia 23
  • p.Ala472= Single submitter primary ciliary dyskinesia 23
  • p.Ala556= Single submitter primary ciliary dyskinesia 23
  • p.Ala560= Single submitter primary ciliary dyskinesia 23
  • p.Ala602= Single submitter
  • p.Ala733= Single submitter primary ciliary dyskinesia 23
  • p.Ala734= Single submitter
  • p.Ala820= Single submitter primary ciliary dyskinesia 23
  • p.Arg349Ser Single submitter primary ciliary dyskinesia
  • p.Arg413Trp Single submitter primary ciliary dyskinesia
  • p.Arg440= Single submitter primary ciliary dyskinesia
  • p.Arg477= Single submitter primary ciliary dyskinesia 23
  • p.Arg753= Single submitter
  • p.Arg939= Single submitter primary ciliary dyskinesia
  • p.Asn152= Single submitter primary ciliary dyskinesia 23
  • p.Asn233= Single submitter primary ciliary dyskinesia
  • p.Asn354= Single submitter primary ciliary dyskinesia
  • p.Asn647= Single submitter primary ciliary dyskinesia 23
  • p.Asp160= Single submitter primary ciliary dyskinesia 23
  • p.Asp161Gly Single submitter primary ciliary dyskinesia
  • p.Asp325= Single submitter primary ciliary dyskinesia 23
  • p.Asp604= Single submitter primary ciliary dyskinesia 23
  • p.Asp853= Single submitter primary ciliary dyskinesia 23
  • p.Cys865= Single submitter primary ciliary dyskinesia 23
  • p.Gln106= Single submitter
  • p.Gln177= Single submitter primary ciliary dyskinesia
  • p.Gln326= Single submitter primary ciliary dyskinesia 23
  • p.Gln487= Single submitter primary ciliary dyskinesia 23
  • p.Gln768= Single submitter primary ciliary dyskinesia 23
  • p.Glu230= Single submitter primary ciliary dyskinesia
  • p.Glu368= Single submitter
  • p.Glu432= Single submitter primary ciliary dyskinesia 23
  • p.Glu434Asp Single submitter primary ciliary dyskinesia
  • p.Glu705= Single submitter primary ciliary dyskinesia 23
  • p.Glu770= Single submitter primary ciliary dyskinesia 23
  • p.Gly155= Single submitter primary ciliary dyskinesia 23
  • p.Gly215= Single submitter
  • p.Gly234= Single submitter primary ciliary dyskinesia 23
  • p.Gly576= Single submitter primary ciliary dyskinesia 23
  • p.Gly577= Single submitter primary ciliary dyskinesia 23
  • p.Gly797= Single submitter primary ciliary dyskinesia 23
  • p.His713= Single submitter primary ciliary dyskinesia 23
  • p.Ile101= Single submitter primary ciliary dyskinesia 23
  • p.Ile343= Single submitter primary ciliary dyskinesia 23
  • p.Ile866= Single submitter primary ciliary dyskinesia 23
  • p.Ile886= Single submitter primary ciliary dyskinesia
  • p.Leu1008= Single submitter primary ciliary dyskinesia 23
  • p.Leu1010= Single submitter primary ciliary dyskinesia 23
  • p.Leu110= Single submitter primary ciliary dyskinesia
  • p.Leu175= Single submitter primary ciliary dyskinesia 23
  • p.Leu187= Single submitter primary ciliary dyskinesia 23
  • p.Leu260= Single submitter primary ciliary dyskinesia 23
  • p.Leu294= Single submitter primary ciliary dyskinesia 23
  • p.Leu371= Single submitter primary ciliary dyskinesia 23
  • p.Leu518= Single submitter primary ciliary dyskinesia 23
  • p.Leu537= Single submitter primary ciliary dyskinesia
  • p.Leu544= Single submitter primary ciliary dyskinesia 23
  • p.Leu584= Single submitter primary ciliary dyskinesia 23
  • p.Leu599= Single submitter primary ciliary dyskinesia 23
  • p.Leu636= Single submitter primary ciliary dyskinesia
  • p.Leu649= Single submitter primary ciliary dyskinesia 23
  • p.Leu722= Single submitter primary ciliary dyskinesia 23
  • p.Leu761= Single submitter primary ciliary dyskinesia 23
  • p.Leu885= Single submitter primary ciliary dyskinesia 23
  • p.Leu92= Single submitter primary ciliary dyskinesia 23
  • p.Leu930= Single submitter primary ciliary dyskinesia 23
  • p.Leu942= Single submitter primary ciliary dyskinesia 23
  • p.Leu987= Single submitter primary ciliary dyskinesia 23
  • p.Lys203= Single submitter primary ciliary dyskinesia 23
  • p.Lys214= Single submitter primary ciliary dyskinesia 23
  • p.Lys418= Single submitter primary ciliary dyskinesia 23
  • p.Lys519= Single submitter primary ciliary dyskinesia
  • p.Lys867Glu Single submitter primary ciliary dyskinesia
  • p.Lys973= Single submitter primary ciliary dyskinesia 23
  • p.Phe959= Single submitter primary ciliary dyskinesia 23
  • p.Pro402= Single submitter
  • p.Pro448= Single submitter primary ciliary dyskinesia
  • p.Pro538= Single submitter primary ciliary dyskinesia 23
  • p.Pro718= Single submitter primary ciliary dyskinesia
  • p.Pro850= Single submitter primary ciliary dyskinesia
  • p.Pro967= Single submitter primary ciliary dyskinesia 23
  • p.Ser289= Single submitter primary ciliary dyskinesia 23
  • p.Ser302= Single submitter primary ciliary dyskinesia 23
  • p.Ser317= Single submitter primary ciliary dyskinesia 23
  • p.Ser426= Single submitter primary ciliary dyskinesia 23
  • p.Ser444Asn Single submitter primary ciliary dyskinesia
  • p.Ser878= Single submitter primary ciliary dyskinesia 23
  • p.Thr143= Single submitter primary ciliary dyskinesia 23
  • p.Thr259= Single submitter primary ciliary dyskinesia 23
  • p.Thr505= Single submitter primary ciliary dyskinesia 23
  • p.Thr558= Single submitter primary ciliary dyskinesia 23
  • p.Thr643= Single submitter primary ciliary dyskinesia 23
  • p.Thr750= Single submitter primary ciliary dyskinesia 23
  • p.Tyr460= Single submitter primary ciliary dyskinesia 23
  • p.Val1006= Single submitter primary ciliary dyskinesia 23
  • p.Val571= Single submitter primary ciliary dyskinesia 23
  • p.Val572= Single submitter primary ciliary dyskinesia 23
  • p.Val652= Single submitter primary ciliary dyskinesia 23
  • p.Val710= Single submitter primary ciliary dyskinesia 23
  • p.Val762= Single submitter primary ciliary dyskinesia 23
  • p.Val774= Single submitter primary ciliary dyskinesia 23
  • p.Val815= Single submitter
  • p.Val979= Single submitter primary ciliary dyskinesia 23
  • c.1143-5dup No assertion criteria ODAD2-related disorder
  • c.820-8dup No assertion criteria ODAD2-related disorder
  • c.937-8A>C No assertion criteria ODAD2-related disorder
  • p.Asp391= No assertion criteria ODAD2-related disorder
  • p.Gly313= No assertion criteria ODAD2-related disorder

Uncertain significance 289