PDE11A — 251 ClinVar variants

All ClinVar germline PDE11A variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 154 flagged for review →

2 Pathogenic/Likely pathogenic · 9 Likely pathogenic · 10 Conflicting · 31 Benign · 2 Benign/Likely benign · 27 Likely benign · 170 Uncertain significance

Full PDE11A gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 154

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 5

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 101

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 48

The independent predictors disagree with each other — read with care.

All PDE11A variants

Pathogenic/Likely pathogenic 2

  • p.Ser604Ter Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Ser757fs Multiple submitters pigmented nodular adrenocortical disease, primary, 2

Likely pathogenic 9

  • c.1936-2A>T Single submitter
  • p.Ala246fs Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Arg154fs Single submitter
  • p.Gln415Ter Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Gln529Ter Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Gln638fs Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Gln686Ter Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Ser424fs Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Tyr383Ter Single submitter pigmented nodular adrenocortical disease, primary, 2

Conflicting classifications of pathogenicity 10

  • p.Ala883Thr Single submitter pigmented nodular adrenocortical disease, primary, 2 ⚠
  • p.Arg307Ter Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Arg52Thr Single submitter ⚠
  • p.Arg7fs Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Asp609Asn Single submitter ⚠
  • p.Cys554fs Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Gln46fs Single submitter PDE11A-related disorder
  • p.Gly77Arg Single submitter ⚠
  • p.Ile552Thr Single submitter pigmented nodular adrenocortical disease, primary, 2 ⚠
  • p.Thr58fs Single submitter Bardet-Biedl syndrome 16

Benign 31

  • c.1576+26C>T Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • c.1577-3T>C Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • c.1737+22G>A Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • c.2424-47T>C Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • c.2488-29T>C Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • c.2563-26G>A Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Ala542= Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Arg184Gln Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Arg202Cys Multiple submitters
  • p.Arg659= Multiple submitters
  • p.Arg867Gly Multiple submitters ⚠
  • p.Leu49= Multiple submitters
  • p.Leu880Phe Multiple submitters
  • p.Ser921dup Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Thr264= Multiple submitters pigmented nodular adrenocortical disease, primary, 2
  • p.Tyr796= Multiple submitters
  • c.1577-4A>G Single submitter
  • c.2043+7G>A Single submitter
  • p.Glu691Lys Single submitter ⚠
  • p.Leu581= Single submitter
  • p.Leu618= Single submitter
  • p.Phe715= Single submitter
  • p.Pro495= Single submitter
  • p.Ser570Pro Single submitter pigmented nodular adrenocortical disease, primary, 2
  • p.Thr219= Single submitter
  • p.Thr778= Single submitter
  • c.1072-3C>T No assertion criteria PDE11A-related disorder
  • p.Ala678Thr No assertion criteria PDE11A-related disorder
  • p.Asn298Ser No assertion criteria PDE11A-related disorder ⚠
  • p.Glu421= No assertion criteria PDE11A-related disorder
  • p.Thr51Ile No assertion criteria PDE11A-related disorder

Benign/Likely benign 2

Likely benign 27

Uncertain significance 170