PFN1 — 99 ClinVar variants
All ClinVar germline PFN1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 33 flagged for review →
4 Pathogenic · 1 Likely pathogenic · 1 Conflicting · 9 Benign · 2 Benign/Likely benign · 40 Likely benign · 42 Uncertain significance
Full PFN1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 33
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
PFN1 p.Glu117Gly
Conflicting
Single submitter
amyotrophic lateral sclerosis type 18
Predictors lean, ClinVar uncertain 21
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
- PFN1 p.His134Pro Uncertain significance Multiple submitters
-
PFN1 p.Leu123Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
PFN1 p.Pro29Leu
Uncertain significance
Multiple submitters
amyotrophic lateral sclerosis
-
PFN1 p.Ala13Thr
Uncertain significance
Single submitter
amyotrophic lateral sclerosis
- PFN1 p.Arg136Trp Uncertain significance Single submitter
- PFN1 p.Arg56Gln Uncertain significance Single submitter
- PFN1 p.Asn62Ser Uncertain significance Single submitter
-
PFN1 p.Asp14Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
PFN1 p.Gln139Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
PFN1 p.Gly118Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- PFN1 p.Gly15Arg Uncertain significance Single submitter
- PFN1 p.Gly63Arg Uncertain significance Single submitter
- PFN1 p.Leu11Phe Uncertain significance Single submitter
- PFN1 p.Leu135Arg Uncertain significance Single submitter
- PFN1 p.Met86Ile Uncertain significance Single submitter
-
PFN1 p.Ser58Asn
Uncertain significance
Single submitter
Inborn genetic diseases
- PFN1 p.Thr93Ile Uncertain significance Single submitter
- PFN1 p.Val101Ala Uncertain significance Single submitter
- PFN1 p.Val101Ile Uncertain significance Single submitter
- PFN1 p.Val23Gly Uncertain significance Single submitter
-
PFN1 p.Ala33Thr
Uncertain significance
No assertion criteria
PFN1-related disorder
Predictors split 11
The independent predictors disagree with each other — read with care.
-
PFN1 p.Gly94Cys
Uncertain significance
Multiple submitters
PFN1-related disorder
-
PFN1 p.Leu66Phe
Uncertain significance
Multiple submitters
Inborn genetic diseases
- PFN1 p.Val61Met Uncertain significance Multiple submitters
-
PFN1 p.Arg137Cys
Uncertain significance
Single submitter
amyotrophic lateral sclerosis type 18
- PFN1 p.Ile74Val Uncertain significance Single submitter
- PFN1 p.Met114Arg Uncertain significance Single submitter
-
PFN1 p.Met114Thr
Pathogenic
Single submitter
amyotrophic lateral sclerosis type 18
-
PFN1 p.Met12Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- PFN1 p.Met131Ile Uncertain significance Single submitter
-
PFN1 p.Ser28Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- PFN1 p.Val52Leu Uncertain significance Single submitter
All PFN1 variants
Pathogenic 4
- p.Cys71Gly Single submitter amyotrophic lateral sclerosis type 18
- p.Gly118Val Single submitter amyotrophic lateral sclerosis type 18
- p.Met114Thr Single submitter amyotrophic lateral sclerosis type 18 ⚠
- c.325+10T>C No assertion criteria PAGET DISEASE OF BONE 7, EARLY-ONSET
Likely pathogenic 1
- p.Asp107fs Multiple submitters amyotrophic lateral sclerosis type 18
Conflicting classifications of pathogenicity 1
- p.Glu117Gly Single submitter amyotrophic lateral sclerosis type 18 ⚠
Benign 9
- c.132+133G>C Multiple submitters
- c.133-197C>G Multiple submitters
- c.325+149C>T Multiple submitters
- c.325+288T>C Multiple submitters
- c.325+296T>A Multiple submitters
- c.326-92G>A Multiple submitters
- p.Leu112= Multiple submitters amyotrophic lateral sclerosis type 18
- c.326-16T>C Single submitter
- p.Gln139= Single submitter
Benign/Likely benign 2
- p.Glu117Asp Multiple submitters amyotrophic lateral sclerosis type 18
- p.Ser133= Multiple submitters
Likely benign 40
- c.133-125A>G Multiple submitters
- c.326-254A>G Multiple submitters
- c.132+12C>A Single submitter
- c.132+17G>A Single submitter
- c.132+20G>T Single submitter
- c.133-8T>G Single submitter
- c.133-9C>T Single submitter
- c.325+18dup Single submitter
- c.326-13C>A Single submitter
- c.326-14TCC[3] Single submitter
- c.326-15_326-14del Single submitter
- c.326-17_326-16del Single submitter
- c.326-17C>T Single submitter
- c.326-21_326-18del Single submitter
- c.326-229C>T Single submitter
- c.326-4C>T Single submitter
- c.326-7C>T Single submitter
- c.326-9C>T Single submitter
- p.Arg136= Single submitter
- p.Gly115= Single submitter
- p.Gly15= Single submitter
- p.Gly67= Single submitter
- p.His120= Single submitter
- p.Ile74= Single submitter
- p.Ile8= Single submitter
- p.Leu78= Single submitter
- p.Lys38= Single submitter
- p.Lys91= Single submitter
- p.Ser30= Single submitter
- p.Ser72= Single submitter
- p.Ser77= Single submitter
- p.Thr109= Single submitter
- p.Thr16= Single submitter
- p.Thr98= Single submitter
- p.Val35= Single submitter
- p.Val41= Single submitter
- c.*4C>T No assertion criteria PFN1-related disorder
- c.*5G>A No assertion criteria PFN1-related disorder
- c.*7C>G No assertion criteria PFN1-related disorder
- p.Thr93= No assertion criteria PFN1-related disorder
Uncertain significance 42
- p.Gly94Cys Multiple submitters PFN1-related disorder ⚠
- p.His134Pro Multiple submitters ⚠
- p.Leu123Phe Multiple submitters Inborn genetic diseases ⚠
- p.Leu66Phe Multiple submitters Inborn genetic diseases ⚠
- p.Pro29Leu Multiple submitters amyotrophic lateral sclerosis ⚠
- p.Val61Met Multiple submitters ⚠
- c.132+4C>T Single submitter
- c.132+5T>A Single submitter
- c.133-3C>T Single submitter
- p.Ala13Thr Single submitter amyotrophic lateral sclerosis ⚠
- p.Ala13Val Single submitter
- p.Ala46Pro Single submitter Inborn genetic diseases
- p.Arg136Trp Single submitter ⚠
- p.Arg137Cys Single submitter amyotrophic lateral sclerosis type 18 ⚠
- p.Arg56Gln Single submitter ⚠
- p.Asn62Ser Single submitter ⚠
- p.Asp107Ter Single submitter
- p.Asp14Glu Single submitter Inborn genetic diseases ⚠
- p.Gln139Glu Single submitter Inborn genetic diseases ⚠
- p.Glu117del Single submitter
- p.Gly118Ser Single submitter Inborn genetic diseases ⚠
- p.Gly15Arg Single submitter ⚠
- p.Gly63Arg Single submitter ⚠
- p.Gly94Asp Single submitter
- p.Ile74Val Single submitter ⚠
- p.Leu11Phe Single submitter ⚠
- p.Leu135Arg Single submitter ⚠
- p.Met114Arg Single submitter ⚠
- p.Met12Thr Single submitter Inborn genetic diseases ⚠
- p.Met131Ile Single submitter ⚠
- p.Met86Ile Single submitter ⚠
- p.Ser28Leu Single submitter Inborn genetic diseases ⚠
- p.Ser30Tyr Single submitter Inborn genetic diseases
- p.Ser58Asn Single submitter Inborn genetic diseases ⚠
- p.Thr44Ala Single submitter
- p.Thr93Ile Single submitter ⚠
- p.Tyr25Leu Single submitter
- p.Val101Ala Single submitter ⚠
- p.Val101Ile Single submitter ⚠
- p.Val23Gly Single submitter ⚠
- p.Val52Leu Single submitter ⚠
- p.Ala33Thr No assertion criteria PFN1-related disorder ⚠