RAB3GAP1 — 606 ClinVar variants

All ClinVar germline RAB3GAP1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 195 flagged for review →

53 Pathogenic · 8 Pathogenic/Likely pathogenic · 19 Likely pathogenic · 14 Conflicting · 52 Benign · 11 Benign/Likely benign · 195 Likely benign · 254 Uncertain significance

Full RAB3GAP1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 195

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 7

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 145

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 43

The independent predictors disagree with each other — read with care.

All RAB3GAP1 variants

Pathogenic 53

Pathogenic/Likely pathogenic 8

  • p.Arg174Ter Multiple submitters RAB3GAP1-related disorder
  • p.Arg337Ter Multiple submitters Autosomal recessive RAB3GAP1-related disorders
  • p.Glu493fs Multiple submitters RAB3GAP1-related disorder
  • p.Gly396fs Multiple submitters RAB3GAP1-related disorder
  • p.Ile211fs Multiple submitters Warburg micro syndrome 1
  • p.Lys144Ter Multiple submitters Warburg micro syndrome 1
  • p.Pro782fs Multiple submitters
  • p.Trp23Ter Multiple submitters

Likely pathogenic 19

Conflicting classifications of pathogenicity 14

Benign 52

Benign/Likely benign 11

Likely benign 195

Uncertain significance 254