RBPJ — 195 ClinVar variants
All ClinVar germline RBPJ variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 58 flagged for review →
1 Pathogenic · 3 Likely pathogenic · 5 Conflicting · 34 Benign · 8 Benign/Likely benign · 68 Likely benign · 76 Uncertain significance
Full RBPJ gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 58
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 4
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
RBPJ p.Ala336Val
Conflicting
Single submitter
Inborn genetic diseases
-
RBPJ p.Leu335Pro
Conflicting
Single submitter
Inborn genetic diseases
-
RBPJ p.Pro457Arg
Conflicting
Single submitter
Inborn genetic diseases
- RBPJ p.Thr476Ser Conflicting Single submitter
Predictors lean, ClinVar uncertain 39
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
RBPJ p.Glu459Lys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
RBPJ p.Gly10Val
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
RBPJ p.Thr482Ile
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
RBPJ p.Ala274Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Ala356Pro
Uncertain significance
Single submitter
type 2 diabetes mellitus
-
RBPJ p.Ala9Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Arg123Gln
Uncertain significance
Single submitter
type 2 diabetes mellitus
- RBPJ p.Arg147Gln Uncertain significance Single submitter
-
RBPJ p.Asn451Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Asn463Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Asp139Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Cys300Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Cys59Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Cys79Phe
Uncertain significance
Single submitter
Inborn genetic diseases
- RBPJ p.Cys87Arg Uncertain significance Single submitter
- RBPJ p.Gln269Arg Uncertain significance Single submitter
-
RBPJ p.Gln269Glu
Uncertain significance
Single submitter
RBPJ-related disorder
-
RBPJ p.Gln82Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Glu11Lys
Uncertain significance
Single submitter
Inborn genetic diseases
- RBPJ p.Glu290Ala Uncertain significance Single submitter
- RBPJ p.Gly106Arg Uncertain significance Single submitter
-
RBPJ p.Gly135Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Gly93Val
Uncertain significance
Single submitter
Inborn genetic diseases
- RBPJ p.Lys157Glu Uncertain significance Single submitter
- RBPJ p.Lys16Glu Uncertain significance Single submitter
- RBPJ p.Lys16Thr Uncertain significance Single submitter
-
RBPJ p.Lys70Glu
Uncertain significance
Single submitter
Inborn genetic diseases
- RBPJ p.Met99Thr Uncertain significance Single submitter
- RBPJ p.Pro13Ala Uncertain significance Single submitter
- RBPJ p.Pro154Leu Uncertain significance Single submitter
- RBPJ p.Pro15Leu Uncertain significance Single submitter
-
RBPJ p.Pro266Leu
Uncertain significance
Single submitter
Inborn genetic diseases
- RBPJ p.Pro86Arg Uncertain significance Single submitter
-
RBPJ p.Pro8His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Ser442Asn
Uncertain significance
Single submitter
RBPJ-related disorder
- RBPJ p.Ser65Asn Uncertain significance Single submitter
-
RBPJ p.Thr432Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Val355Glu
Uncertain significance
Single submitter
type 2 diabetes mellitus
-
RBPJ p.Pro12Ala
Uncertain significance
No assertion criteria
RBPJ-related disorder
Predictors split 15
The independent predictors disagree with each other — read with care.
-
RBPJ p.Arg17Gln
Uncertain significance
Multiple submitters
Adams-Oliver syndrome 3
-
RBPJ p.Asp77Asn
Uncertain significance
Multiple submitters
Inborn genetic diseases
- RBPJ p.Ala259Ser Uncertain significance Single submitter
- RBPJ p.Arg406Gln Uncertain significance Single submitter
- RBPJ p.Arg76Cys Uncertain significance Single submitter
- RBPJ p.Arg76His Likely benign Single submitter
-
RBPJ p.Asn310Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RBPJ p.Gln257His
Uncertain significance
Single submitter
Adams-Oliver syndrome 3
- RBPJ p.Gly194Glu Uncertain significance Single submitter
- RBPJ p.Ile148Val Uncertain significance Single submitter
-
RBPJ p.Ile395Val
Uncertain significance
Single submitter
type 2 diabetes mellitus
-
RBPJ p.Met132Val
Uncertain significance
Single submitter
type 2 diabetes mellitus
- RBPJ p.Met331Val Uncertain significance Single submitter
- RBPJ p.Met63Thr Uncertain significance Single submitter
- RBPJ p.Pro337Ser Uncertain significance Single submitter
All RBPJ variants
Pathogenic 1
- p.Lys156Glu No assertion criteria Adams-Oliver syndrome 3
Likely pathogenic 3
- p.Arg52Thr Single submitter Adams-Oliver syndrome 3
- p.Phe53Val Single submitter Adams-Oliver syndrome 3
- p.Ser319Arg Single submitter Adams-Oliver syndrome 3
Conflicting classifications of pathogenicity 5
- p.Ala259Thr Single submitter
- p.Ala336Val Single submitter Inborn genetic diseases ⚠
- p.Leu335Pro Single submitter Inborn genetic diseases ⚠
- p.Pro457Arg Single submitter Inborn genetic diseases ⚠
- p.Thr476Ser Single submitter ⚠
Benign 34
- c.21-5del Multiple submitters
- c.322-129G>T Multiple submitters
- c.496+160G>A Multiple submitters
- c.634+15G>A Multiple submitters
- c.748-195A>G Multiple submitters
- c.-57-280G>A Multiple submitters
- c.*193A>G Multiple submitters
- p.Ser65= Multiple submitters
- c.1044+155del Single submitter
- c.1044+155dup Single submitter
- c.1044+8C>T Single submitter
- c.156-14dup Single submitter
- c.156-179G>A Single submitter
- c.156-18dup Single submitter
- c.156-211G>A Single submitter
- c.156-9A>T Single submitter
- c.321+135del Single submitter
- c.497-113C>G Single submitter
- c.888+14T>C Single submitter
- c.889-134A>G Single submitter
- c.889-274A>G Single submitter
- p.Glu465= Single submitter
- p.Tyr26= Single submitter
- c.156-2327G>C No assertion criteria type 2 diabetes mellitus
- c.20+10722T>G No assertion criteria type 2 diabetes mellitus
- c.20+13573C>T No assertion criteria type 2 diabetes mellitus
- c.20+29693T>G No assertion criteria type 2 diabetes mellitus
- c.21-20856T>C No assertion criteria type 2 diabetes mellitus
- c.21-26407G>A No assertion criteria type 2 diabetes mellitus
- c.21-2640G>A No assertion criteria type 2 diabetes mellitus
- c.321+406G>A No assertion criteria type 2 diabetes mellitus
- c.59+2331A>C No assertion criteria type 2 diabetes mellitus
- c.60-5130C>T No assertion criteria type 2 diabetes mellitus
- c.60-8189dup No assertion criteria type 2 diabetes mellitus
Benign/Likely benign 8
- c.156-18T>C Multiple submitters
- c.21-5dup Multiple submitters
- c.21-6_21-5del Multiple submitters
- c.496+19T>C Multiple submitters
- c.634+15G>T Multiple submitters
- c.-65G>C Multiple submitters
- p.Ala444= Multiple submitters
- p.Thr428= Multiple submitters
Likely benign 68
- c.1045-97T>A Multiple submitters
- c.321+147C>T Multiple submitters
- c.497-49C>T Multiple submitters
- c.-57-48A>G Multiple submitters
- p.Asn470= Multiple submitters
- p.Pro154= Multiple submitters
- p.Pro86= Multiple submitters
- p.Thr479= Multiple submitters
- c.1045-53T>G Single submitter
- c.156-6C>A Single submitter
- c.156-7T>G Single submitter
- c.21-11T>A Single submitter
- c.21-23706C>T Single submitter
- c.21-23755G>A Single submitter
- c.321+183C>T Single submitter
- c.321+18G>C Single submitter
- c.321+8A>G Single submitter
- c.322-171T>G Single submitter
- c.59+14T>C Single submitter
- c.59+14T>G Single submitter
- c.59+161G>A Single submitter
- c.59+17_59+20del Single submitter
- c.634+16T>C Single submitter
- c.634+17G>T Single submitter
- c.747+9C>T Single submitter
- c.748-17T>C Single submitter
- c.748-18C>T Single submitter
- c.748-4A>G Single submitter
- c.888+10T>A Single submitter
- c.888+94A>G Single submitter
- c.889-4T>C Single submitter
- c.-15A>C Single submitter
- c.-47+889G>C Single submitter
- c.-57-200G>T Single submitter
- c.-58+14G>C Single submitter
- c.*6G>A Single submitter
- c.*80T>A Single submitter
- p.Ala471Thr Single submitter
- p.Arg123= Single submitter
- p.Arg147= Single submitter
- p.Arg76His Single submitter ⚠
- p.Asn458= Single submitter
- p.Asn461= Single submitter
- p.Asn94= Single submitter
- p.Gln100= Single submitter
- p.Gln203= Single submitter
- p.Gly135= Single submitter
- p.Gly312= Single submitter
- p.Gly332= Single submitter
- p.Gly445= Single submitter
- p.His271= Single submitter
- p.Leu102= Single submitter
- p.Leu180= Single submitter
- p.Leu249= Single submitter
- p.Leu360= Single submitter
- p.Lys149= Single submitter
- p.Lys68= Single submitter
- p.Phe177= Single submitter
- p.Pro299= Single submitter
- p.Pro333= Single submitter
- p.Ser288= Single submitter
- p.Ser346= Single submitter
- p.Ser477= Single submitter
- p.Thr258= Single submitter
- p.Thr280= Single submitter
- p.Thr482= Single submitter
- p.Tyr231= Single submitter
- p.Val376= Single submitter
Uncertain significance 76
- p.Arg17Gln Multiple submitters Adams-Oliver syndrome 3 ⚠
- p.Arg181Ter Multiple submitters
- p.Asp77Asn Multiple submitters Inborn genetic diseases ⚠
- p.Glu459Lys Multiple submitters Inborn genetic diseases ⚠
- p.Gly10Val Multiple submitters Inborn genetic diseases ⚠
- p.Pro86Leu Multiple submitters Inborn genetic diseases
- p.Thr482Ile Multiple submitters Inborn genetic diseases ⚠
- c.497-3C>T Single submitter
- c.59+1G>T Single submitter
- c.59+4A>G Single submitter
- c.635-9_638del Single submitter
- c.888+4T>G Single submitter
- c.-47+878_-47+892del Single submitter
- c.-58+3A>C Single submitter
- c.*16T>G Single submitter
- p.Ala259Ser Single submitter ⚠
- p.Ala274Thr Single submitter Inborn genetic diseases ⚠
- p.Ala356Pro Single submitter type 2 diabetes mellitus ⚠
- p.Ala443Lys Single submitter
- p.Ala9Val Single submitter Inborn genetic diseases ⚠
- p.Arg123Gln Single submitter type 2 diabetes mellitus ⚠
- p.Arg123Ter Single submitter
- p.Arg147Gln Single submitter ⚠
- p.Arg225Ter Single submitter
- p.Arg406Gln Single submitter ⚠
- p.Arg417Ter Single submitter
- p.Arg76Cys Single submitter ⚠
- p.Asn310Ser Single submitter Inborn genetic diseases ⚠
- p.Asn451Ser Single submitter Inborn genetic diseases ⚠
- p.Asn463Ile Single submitter Inborn genetic diseases ⚠
- p.Asp139Val Single submitter Inborn genetic diseases ⚠
- p.Cys300Phe Single submitter Inborn genetic diseases ⚠
- p.Cys390fs Single submitter type 2 diabetes mellitus
- p.Cys59Tyr Single submitter Inborn genetic diseases ⚠
- p.Cys79Phe Single submitter Inborn genetic diseases ⚠
- p.Cys87Arg Single submitter ⚠
- p.Gln257His Single submitter Adams-Oliver syndrome 3 ⚠
- p.Gln269Arg Single submitter ⚠
- p.Gln269Glu Single submitter RBPJ-related disorder ⚠
- p.Gln82Leu Single submitter Inborn genetic diseases ⚠
- p.Glu11Lys Single submitter Inborn genetic diseases ⚠
- p.Glu290Ala Single submitter ⚠
- p.Gly106Arg Single submitter ⚠
- p.Gly135Val Single submitter Inborn genetic diseases ⚠
- p.Gly194Glu Single submitter ⚠
- p.Gly93Val Single submitter Inborn genetic diseases ⚠
- p.Ile148Val Single submitter ⚠
- p.Ile395Val Single submitter type 2 diabetes mellitus ⚠
- p.Lys157Glu Single submitter ⚠
- p.Lys16Glu Single submitter ⚠
- p.Lys16Thr Single submitter ⚠
- p.Lys45fs Single submitter
- p.Lys70Glu Single submitter Inborn genetic diseases ⚠
- p.Met132Val Single submitter type 2 diabetes mellitus ⚠
- p.Met331Val Single submitter ⚠
- p.Met63Thr Single submitter ⚠
- p.Met99Thr Single submitter ⚠
- p.Pro13Ala Single submitter ⚠
- p.Pro154Leu Single submitter ⚠
- p.Pro15Leu Single submitter ⚠
- p.Pro266Leu Single submitter Inborn genetic diseases ⚠
- p.Pro337Ser Single submitter ⚠
- p.Pro86Arg Single submitter ⚠
- p.Pro8His Single submitter Inborn genetic diseases ⚠
- p.Ser442Asn Single submitter RBPJ-related disorder ⚠
- p.Ser65Asn Single submitter ⚠
- p.Ser7Ter Single submitter Adams-Oliver syndrome 3
- p.Thr184= Single submitter
- p.Thr19Ser Single submitter Inborn genetic diseases
- p.Thr432Pro Single submitter Inborn genetic diseases ⚠
- p.Tyr468Ter Single submitter
- p.Val341= Single submitter
- p.Val355Glu Single submitter type 2 diabetes mellitus ⚠
- p.Val355Ile Single submitter Inborn genetic diseases
- c.-47+1dup No assertion criteria RBPJ-related disorder
- p.Pro12Ala No assertion criteria RBPJ-related disorder ⚠