RELT — 99 ClinVar variants
All ClinVar germline RELT variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 67 flagged for review →
4 Pathogenic · 4 Likely pathogenic · 1 Conflicting · 7 Benign · 14 Likely benign · 69 Uncertain significance
Full RELT gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 67
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
RELT p.Arg422Trp
Conflicting
Single submitter
amelogenesis imperfecta, type 3C
Predictors lean, ClinVar uncertain 53
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
RELT p.Ala136Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala164Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala164Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala239Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala267Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala353Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ala410Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg126Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg129Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg152Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg215Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg229His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg278Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg278His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg351His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg354Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg402Cys
Uncertain significance
Single submitter
Inborn genetic diseases
- RELT p.Arg418Cys Uncertain significance Single submitter
-
RELT p.Arg418His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg70Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg8Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Asn220Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Asp379His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Asp39His
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Glu233Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Glu311Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Gly141Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Gly205Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Gly333Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Gly82Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ile344Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Leu241Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Lys302Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Met363Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Phe172Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro147Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro18Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro18Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro18Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro203Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro212Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro269Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro320Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro326Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro33Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Pro390Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ser139Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ser291Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Ser299Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr27Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr28Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr371Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Val169Ile
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 13
The independent predictors disagree with each other — read with care.
-
RELT p.Arg188Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg188Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg351Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Glu341Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Glu78Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Gly54Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Leu345Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr194Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr283Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Thr85Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Trp303Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
RELT p.Arg422Pro
Pathogenic
No assertion criteria
amelogenesis imperfecta, type 3C
-
RELT p.Thr55Ile
Pathogenic
No assertion criteria
amelogenesis imperfecta, type 3C
All RELT variants
Pathogenic 4
- c.121-2A>G No assertion criteria amelogenesis imperfecta, type 3C
- p.Arg422Pro No assertion criteria amelogenesis imperfecta, type 3C ⚠
- p.Pro390fs No assertion criteria amelogenesis imperfecta, type 3C
- p.Thr55Ile No assertion criteria amelogenesis imperfecta, type 3C ⚠
Likely pathogenic 4
- p.Ala288fs Single submitter amelogenesis imperfecta, type 3C
- p.Asp87Val Single submitter amelogenesis imperfecta
- p.Leu174Arg Single submitter amelogenesis imperfecta
- c.120+1G>T No assertion criteria
Conflicting classifications of pathogenicity 1
- p.Arg422Trp Single submitter amelogenesis imperfecta, type 3C ⚠
Benign 7
- p.Ala267= Single submitter
- p.Met363Val No assertion criteria RELT-related disorder
- p.Pro201= No assertion criteria RELT-related disorder
- p.Thr256Met No assertion criteria RELT-related disorder
- p.Thr360= No assertion criteria RELT-related disorder
- p.Val367= No assertion criteria RELT-related disorder
- p.Val367Glu No assertion criteria RELT-related disorder
Likely benign 14
- p.Ala160= Multiple submitters
- c.120+12C>T Single submitter
- c.287+18C>G Single submitter
- c.368-15G>A Single submitter
- c.46-5_46-3del Single submitter
- p.Ala332Val Single submitter
- p.Arg86Gln Single submitter Inborn genetic diseases
- p.Arg8Trp Single submitter Inborn genetic diseases
- p.Ile224Thr Single submitter
- p.Pro390Ala Single submitter Inborn genetic diseases
- p.Pro390Thr Single submitter Inborn genetic diseases
- p.Ser139Gly Single submitter Inborn genetic diseases
- p.Ala314= No assertion criteria RELT-related disorder
- p.Arg338Pro No assertion criteria RELT-related disorder
Uncertain significance 69
- c.287+1G>T Single submitter
- p.Ala136Val Single submitter Inborn genetic diseases ⚠
- p.Ala164Thr Single submitter Inborn genetic diseases ⚠
- p.Ala164Val Single submitter Inborn genetic diseases ⚠
- p.Ala239Val Single submitter Inborn genetic diseases ⚠
- p.Ala267Val Single submitter Inborn genetic diseases ⚠
- p.Ala353Thr Single submitter Inborn genetic diseases ⚠
- p.Ala410Ser Single submitter Inborn genetic diseases ⚠
- p.Arg126Trp Single submitter Inborn genetic diseases ⚠
- p.Arg129Pro Single submitter Inborn genetic diseases ⚠
- p.Arg152Trp Single submitter Inborn genetic diseases ⚠
- p.Arg188Gln Single submitter Inborn genetic diseases ⚠
- p.Arg188Trp Single submitter Inborn genetic diseases ⚠
- p.Arg215Gln Single submitter Inborn genetic diseases ⚠
- p.Arg229His Single submitter Inborn genetic diseases ⚠
- p.Arg278Cys Single submitter Inborn genetic diseases ⚠
- p.Arg278His Single submitter Inborn genetic diseases ⚠
- p.Arg297His Single submitter Inborn genetic diseases
- p.Arg351Cys Single submitter Inborn genetic diseases ⚠
- p.Arg351His Single submitter Inborn genetic diseases ⚠
- p.Arg354Gln Single submitter Inborn genetic diseases ⚠
- p.Arg354Leu Single submitter Inborn genetic diseases
- p.Arg402Cys Single submitter Inborn genetic diseases ⚠
- p.Arg418Cys Single submitter ⚠
- p.Arg418His Single submitter Inborn genetic diseases ⚠
- p.Arg70Leu Single submitter Inborn genetic diseases ⚠
- p.Arg8Gln Single submitter Inborn genetic diseases ⚠
- p.Asn220Ser Single submitter Inborn genetic diseases ⚠
- p.Asp379His Single submitter Inborn genetic diseases ⚠
- p.Asp39His Single submitter Inborn genetic diseases ⚠
- p.Cys121Arg Single submitter Inborn genetic diseases
- p.Glu233Asp Single submitter Inborn genetic diseases ⚠
- p.Glu311Lys Single submitter Inborn genetic diseases ⚠
- p.Glu341Lys Single submitter Inborn genetic diseases ⚠
- p.Glu78Lys Single submitter Inborn genetic diseases ⚠
- p.Gly141Ser Single submitter Inborn genetic diseases ⚠
- p.Gly205Val Single submitter Inborn genetic diseases ⚠
- p.Gly333Arg Single submitter Inborn genetic diseases ⚠
- p.Gly54Asp Single submitter Inborn genetic diseases ⚠
- p.Gly82Asp Single submitter Inborn genetic diseases ⚠
- p.Ile344Val Single submitter Inborn genetic diseases ⚠
- p.Leu241Arg Single submitter Inborn genetic diseases ⚠
- p.Leu345Phe Single submitter Inborn genetic diseases ⚠
- p.Lys302Arg Single submitter Inborn genetic diseases ⚠
- p.Met363Ile Single submitter Inborn genetic diseases ⚠
- p.Phe172Leu Single submitter Inborn genetic diseases ⚠
- p.Pro147Leu Single submitter Inborn genetic diseases ⚠
- p.Pro18Arg Single submitter Inborn genetic diseases ⚠
- p.Pro18Leu Single submitter Inborn genetic diseases ⚠
- p.Pro18Ser Single submitter Inborn genetic diseases ⚠
- p.Pro203Ser Single submitter Inborn genetic diseases ⚠
- p.Pro212Arg Single submitter Inborn genetic diseases ⚠
- p.Pro269Ser Single submitter Inborn genetic diseases ⚠
- p.Pro320Ser Single submitter Inborn genetic diseases ⚠
- p.Pro326Leu Single submitter Inborn genetic diseases ⚠
- p.Pro33Ser Single submitter Inborn genetic diseases ⚠
- p.Pro390Ser Single submitter Inborn genetic diseases ⚠
- p.Ser139Cys Single submitter Inborn genetic diseases ⚠
- p.Ser291Pro Single submitter Inborn genetic diseases ⚠
- p.Ser299Thr Single submitter Inborn genetic diseases ⚠
- p.Thr194Met Single submitter Inborn genetic diseases ⚠
- p.Thr27Ala Single submitter Inborn genetic diseases ⚠
- p.Thr283Ile Single submitter Inborn genetic diseases ⚠
- p.Thr28Pro Single submitter Inborn genetic diseases ⚠
- p.Thr371Met Single submitter Inborn genetic diseases ⚠
- p.Thr85Ile Single submitter Inborn genetic diseases ⚠
- p.Trp303Cys Single submitter Inborn genetic diseases ⚠
- p.Val169Ile Single submitter Inborn genetic diseases ⚠
- p.Val226Leu Single submitter Inborn genetic diseases