RETREG1 — 417 ClinVar variants

All ClinVar germline RETREG1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 177 flagged for review →

15 Pathogenic · 5 Likely pathogenic · 11 Conflicting · 37 Benign · 5 Benign/Likely benign · 129 Likely benign · 215 Uncertain significance

Full RETREG1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 177

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 2

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 144

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 31

The independent predictors disagree with each other — read with care.

All RETREG1 variants

Pathogenic 15

Likely pathogenic 5

Conflicting classifications of pathogenicity 11

  • c.321-10G>A Single submitter neuropathy, hereditary sensory and autonomic, type 2B
  • p.Ala394= Single submitter Inborn genetic diseases
  • p.Arg127His Single submitter Inborn genetic diseases ⚠
  • p.Asp363= Single submitter Inborn genetic diseases
  • p.Glu300= Single submitter neuropathy, hereditary sensory and autonomic, type 2B
  • p.Leu250= Single submitter Inborn genetic diseases
  • p.Leu493= Single submitter neuropathy, hereditary sensory and autonomic, type 2B
  • p.Lys241= Single submitter Inborn genetic diseases
  • p.Pro338Leu Single submitter neuropathy, hereditary sensory and autonomic, type 2B ⚠
  • p.Ser88= Single submitter neuropathy, hereditary sensory and autonomic, type 2B
  • p.Ser276fs No assertion criteria hereditary sensory and autonomic neuropathy type 2

Benign 37

Benign/Likely benign 5

  • c.459-17dup Multiple submitters
  • p.Arg127Cys Multiple submitters Inborn genetic diseases
  • p.Gln379Glu Multiple submitters neuropathy, hereditary sensory and autonomic, type 2B
  • p.Leu146= Multiple submitters neuropathy, hereditary sensory and autonomic, type 2B
  • p.Val203Met Multiple submitters Inborn genetic diseases

Likely benign 129

Uncertain significance 215