SERPING1 — 854 ClinVar variants

All ClinVar germline SERPING1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 253 flagged for review →

261 Pathogenic · 10 Pathogenic/Likely pathogenic · 90 Likely pathogenic · 37 Conflicting · 39 Benign · 14 Benign/Likely benign · 162 Likely benign · 241 Uncertain significance

Full SERPING1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 253

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors vs ClinVar 8

ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.

Predictors agree, ClinVar conflicts 25

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predicted LoF vs a conflicting call 2

ClinVar submitters conflict, and it's a predicted loss-of-function change in a gene where LoF causes disease — flagged for review, not resolved (verify NMD-escape for C-terminal truncations). Non-missense.

Predictors lean, ClinVar uncertain 167

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 167

Predictors split 51

The independent predictors disagree with each other — read with care.

All SERPING1 variants

Pathogenic 261

Pathogenic/Likely pathogenic 10

  • c.51+3A>C Multiple submitters hereditary angioedema type 1
  • c.551-1G>C Multiple submitters hereditary angioedema type 1
  • p.Asn272del Multiple submitters hereditary angioedema type 1
  • p.Asp408Gly Multiple submitters Inborn genetic diseases ⚠
  • p.Glu417Ter Multiple submitters
  • p.Gly184Arg Multiple submitters hereditary angioedema type 1
  • p.Gly493Arg Multiple submitters hereditary angioedema type 1
  • p.Leu386fs Multiple submitters hereditary angioedema type 1
  • p.Phe169Ser Multiple submitters hereditary angioedema type 1
  • p.Phe313Leu Multiple submitters SERPING1-related disorder

Likely pathogenic 90

Conflicting classifications of pathogenicity 37

Benign 39

Benign/Likely benign 14

  • c.1029+5G>T Multiple submitters hereditary angioedema type 1
  • c.1250-154C>G Multiple submitters hereditary angioedema type 1
  • c.686-9T>C Multiple submitters hereditary angioedema type 1
  • c.-21T>C Multiple submitters hereditary angioedema type 1
  • p.Ala156= Multiple submitters Inborn genetic diseases
  • p.Gly17= Multiple submitters hereditary angioedema type 1
  • p.Gly43= Multiple submitters Inborn genetic diseases
  • p.His155= Multiple submitters hereditary angioedema type 1
  • p.Leu151= Multiple submitters Inborn genetic diseases
  • p.Leu251= Multiple submitters hereditary angioedema type 1
  • p.Ser283= Multiple submitters hereditary angioedema type 1
  • p.Thr48Ala Multiple submitters hereditary angioedema type 1
  • p.Val480Met Multiple submitters Inborn genetic diseases
  • p.Pro94fs No assertion criteria

Likely benign 162

Uncertain significance 241