SH2B3 — 1035 ClinVar variants

All ClinVar germline SH2B3 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 655 flagged for review →

5 Pathogenic · 1 Likely pathogenic · 7 Conflicting · 17 Benign · 5 Benign/Likely benign · 319 Likely benign · 681 Uncertain significance

Full SH2B3 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 655

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 7

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 538

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 538

Predictors split 110

The independent predictors disagree with each other — read with care.

All SH2B3 variants

Pathogenic 5

Likely pathogenic 1

  • p.Glu523fs Single submitter primary myelofibrosis

Conflicting classifications of pathogenicity 7

Benign 17

Benign/Likely benign 5

Likely benign 319

Showing the top 300 by review status; the full set is in the sitemap.

  • p.Ala206= Multiple submitters Inborn genetic diseases
  • p.Asp291= Multiple submitters Inborn genetic diseases
  • p.Gln379= Multiple submitters Inborn genetic diseases
  • p.Gln467= Multiple submitters Inborn genetic diseases
  • p.Thr419= Multiple submitters Inborn genetic diseases
  • p.Val456= Multiple submitters Inborn genetic diseases
  • c.1022-10_1022-6del Single submitter
  • c.1236+4TGGGG[3] Single submitter
  • c.733-10G>C Single submitter
  • c.733-1840G>C Single submitter
  • c.927-20C>T Single submitter
  • p.Ala100= Single submitter Inborn genetic diseases
  • p.Ala102= Single submitter Inborn genetic diseases
  • p.Ala111= Single submitter Inborn genetic diseases
  • p.Ala118= Single submitter Inborn genetic diseases
  • p.Ala125= Single submitter Inborn genetic diseases
  • p.Ala14= Single submitter Inborn genetic diseases
  • p.Ala151= Single submitter Inborn genetic diseases
  • p.Ala157= Single submitter Inborn genetic diseases
  • p.Ala161= Single submitter Inborn genetic diseases
  • p.Ala188= Single submitter Inborn genetic diseases
  • p.Ala195= Single submitter Inborn genetic diseases
  • p.Ala199= Single submitter Inborn genetic diseases
  • p.Ala20= Single submitter Inborn genetic diseases
  • p.Ala209= Single submitter Inborn genetic diseases
  • p.Ala21= Single submitter Inborn genetic diseases
  • p.Ala215= Single submitter Inborn genetic diseases
  • p.Ala223= Single submitter Inborn genetic diseases
  • p.Ala227= Single submitter Inborn genetic diseases
  • p.Ala300= Single submitter Inborn genetic diseases
  • p.Ala315= Single submitter Inborn genetic diseases
  • p.Ala34= Single submitter Inborn genetic diseases
  • p.Ala351= Single submitter Inborn genetic diseases
  • p.Ala36= Single submitter Inborn genetic diseases
  • p.Ala37= Single submitter Inborn genetic diseases
  • p.Ala411= Single submitter Inborn genetic diseases
  • p.Ala452= Single submitter Inborn genetic diseases
  • p.Ala550= Single submitter Inborn genetic diseases
  • p.Ala56= Single submitter Inborn genetic diseases
  • p.Ala567= Single submitter Inborn genetic diseases
  • p.Ala60= Single submitter Inborn genetic diseases
  • p.Ala84= Single submitter Inborn genetic diseases
  • p.Ala98= Single submitter Inborn genetic diseases
  • p.Arg119= Single submitter Inborn genetic diseases
  • p.Arg128= Single submitter Inborn genetic diseases
  • p.Arg140= Single submitter Inborn genetic diseases
  • p.Arg143= Single submitter Inborn genetic diseases
  • p.Arg147= Single submitter Inborn genetic diseases
  • p.Arg148= Single submitter Inborn genetic diseases
  • p.Arg149= Single submitter Inborn genetic diseases
  • p.Arg175= Single submitter Inborn genetic diseases
  • p.Arg202= Single submitter Inborn genetic diseases
  • p.Arg216= Single submitter Inborn genetic diseases
  • p.Arg219= Single submitter Inborn genetic diseases
  • p.Arg221= Single submitter Inborn genetic diseases
  • p.Arg225= Single submitter Inborn genetic diseases
  • p.Arg226= Single submitter Inborn genetic diseases
  • p.Arg235= Single submitter Inborn genetic diseases
  • p.Arg24= Single submitter Inborn genetic diseases
  • p.Arg247= Single submitter Inborn genetic diseases
  • p.Arg247Lys Single submitter Inborn genetic diseases
  • p.Arg261= Single submitter Inborn genetic diseases
  • p.Arg265= Single submitter Inborn genetic diseases
  • p.Arg282= Single submitter Inborn genetic diseases
  • p.Arg39= Single submitter Inborn genetic diseases
  • p.Arg397= Single submitter Inborn genetic diseases
  • p.Arg421= Single submitter Inborn genetic diseases
  • p.Arg425= Single submitter Inborn genetic diseases
  • p.Arg43= Single submitter Inborn genetic diseases
  • p.Arg50= Single submitter Inborn genetic diseases
  • p.Arg508= Single submitter Inborn genetic diseases
  • p.Arg549= Single submitter Inborn genetic diseases
  • p.Arg551= Single submitter Inborn genetic diseases
  • p.Arg566= Single submitter Inborn genetic diseases
  • p.Arg59= Single submitter Inborn genetic diseases
  • p.Arg73= Single submitter Inborn genetic diseases
  • p.Arg77= Single submitter Inborn genetic diseases
  • p.Arg80= Single submitter Inborn genetic diseases
  • p.Arg87= Single submitter Inborn genetic diseases
  • p.Arg90= Single submitter Inborn genetic diseases
  • p.Asn2= Single submitter Inborn genetic diseases
  • p.Asn271= Single submitter Inborn genetic diseases
  • p.Asn537= Single submitter Inborn genetic diseases
  • p.Asn548= Single submitter Inborn genetic diseases
  • p.Asn548Ser Single submitter Inborn genetic diseases
  • p.Asn570= Single submitter Inborn genetic diseases
  • p.Asp212= Single submitter Inborn genetic diseases
  • p.Asp234= Single submitter Inborn genetic diseases
  • p.Asp284= Single submitter Inborn genetic diseases
  • p.Asp336= Single submitter Inborn genetic diseases
  • p.Asp485_Trp492del Single submitter
  • p.Asp569= Single submitter Inborn genetic diseases
  • p.Asp69= Single submitter Inborn genetic diseases
  • p.Asp81= Single submitter Inborn genetic diseases
  • p.Cys450= Single submitter Inborn genetic diseases
  • p.Gln136= Single submitter Inborn genetic diseases
  • p.Gln251= Single submitter Inborn genetic diseases
  • p.Gln294= Single submitter Inborn genetic diseases
  • p.Gln376= Single submitter Inborn genetic diseases
  • p.Gln393= Single submitter Inborn genetic diseases
  • p.Gln408= Single submitter Inborn genetic diseases
  • p.Gln427= Single submitter Inborn genetic diseases
  • p.Gln54= Single submitter Inborn genetic diseases
  • p.Gln540= Single submitter Inborn genetic diseases
  • p.Gln54His Single submitter Inborn genetic diseases
  • p.Gln66= Single submitter Inborn genetic diseases
  • p.Glu123= Single submitter Inborn genetic diseases
  • p.Glu153= Single submitter Inborn genetic diseases
  • p.Glu194= Single submitter Inborn genetic diseases
  • p.Glu198= Single submitter Inborn genetic diseases
  • p.Glu267= Single submitter Inborn genetic diseases
  • p.Glu28= Single submitter Inborn genetic diseases
  • p.Glu288= Single submitter Inborn genetic diseases
  • p.Glu292= Single submitter Inborn genetic diseases
  • p.Glu324= Single submitter Inborn genetic diseases
  • p.Glu495= Single submitter Inborn genetic diseases
  • p.Glu51= Single submitter Inborn genetic diseases
  • p.Glu533= Single submitter Inborn genetic diseases
  • p.Glu545= Single submitter Inborn genetic diseases
  • p.Gly107= Single submitter Inborn genetic diseases
  • p.Gly131= Single submitter Inborn genetic diseases
  • p.Gly152= Single submitter Inborn genetic diseases
  • p.Gly164= Single submitter Inborn genetic diseases
  • p.Gly167= Single submitter Inborn genetic diseases
  • p.Gly214= Single submitter Inborn genetic diseases
  • p.Gly220= Single submitter Inborn genetic diseases
  • p.Gly229= Single submitter Inborn genetic diseases
  • p.Gly232= Single submitter Inborn genetic diseases
  • p.Gly3= Single submitter Inborn genetic diseases
  • p.Gly309= Single submitter Inborn genetic diseases
  • p.Gly341= Single submitter Inborn genetic diseases
  • p.Gly345= Single submitter Inborn genetic diseases
  • p.Gly382= Single submitter Inborn genetic diseases
  • p.Gly399= Single submitter Inborn genetic diseases
  • p.Gly409= Single submitter Inborn genetic diseases
  • p.Gly422= Single submitter Inborn genetic diseases
  • p.Gly451= Single submitter Inborn genetic diseases
  • p.Gly505= Single submitter Inborn genetic diseases
  • p.Gly509= Single submitter Inborn genetic diseases
  • p.Gly514= Single submitter Inborn genetic diseases
  • p.Gly82= Single submitter Inborn genetic diseases
  • p.Gly86= Single submitter Inborn genetic diseases
  • p.Gly95= Single submitter Inborn genetic diseases
  • p.His137= Single submitter Inborn genetic diseases
  • p.His33= Single submitter Inborn genetic diseases
  • p.His357= Single submitter Inborn genetic diseases
  • p.His366= Single submitter Inborn genetic diseases
  • p.His386= Single submitter Inborn genetic diseases
  • p.His413= Single submitter Inborn genetic diseases
  • p.His428= Single submitter Inborn genetic diseases
  • p.His52= Single submitter Inborn genetic diseases
  • p.His544= Single submitter Inborn genetic diseases
  • p.His55= Single submitter Inborn genetic diseases
  • p.Ile145= Single submitter Inborn genetic diseases
  • p.Ile257= Single submitter Inborn genetic diseases
  • p.Ile285= Single submitter Inborn genetic diseases
  • p.Ile286= Single submitter Inborn genetic diseases
  • p.Ile446= Single submitter Inborn genetic diseases
  • p.Ile525= Single submitter Inborn genetic diseases
  • p.Ile568= Single submitter Inborn genetic diseases
  • p.Leu115= Single submitter Inborn genetic diseases
  • p.Leu124= Single submitter Inborn genetic diseases
  • p.Leu154= Single submitter Inborn genetic diseases
  • p.Leu183= Single submitter Inborn genetic diseases
  • p.Leu196= Single submitter Inborn genetic diseases
  • p.Leu201= Single submitter Inborn genetic diseases
  • p.Leu205= Single submitter Inborn genetic diseases
  • p.Leu224= Single submitter Inborn genetic diseases
  • p.Leu272= Single submitter Inborn genetic diseases
  • p.Leu277= Single submitter Inborn genetic diseases
  • p.Leu302= Single submitter Inborn genetic diseases
  • p.Leu347= Single submitter Inborn genetic diseases
  • p.Leu359= Single submitter Inborn genetic diseases
  • p.Leu390= Single submitter Inborn genetic diseases
  • p.Leu403= Single submitter Inborn genetic diseases
  • p.Leu41= Single submitter Inborn genetic diseases
  • p.Leu416= Single submitter Inborn genetic diseases
  • p.Leu429= Single submitter Inborn genetic diseases
  • p.Leu448= Single submitter Inborn genetic diseases
  • p.Leu458= Single submitter Inborn genetic diseases
  • p.Leu47= Single submitter Inborn genetic diseases
  • p.Leu476= Single submitter Inborn genetic diseases
  • p.Leu535= Single submitter Inborn genetic diseases
  • p.Leu539= Single submitter Inborn genetic diseases
  • p.Leu6= Single submitter Inborn genetic diseases
  • p.Leu65= Single submitter Inborn genetic diseases
  • p.Leu70= Single submitter Inborn genetic diseases
  • p.Lys117= Single submitter Inborn genetic diseases
  • p.Lys180Arg Single submitter Inborn genetic diseases
  • p.Lys354= Single submitter Inborn genetic diseases
  • p.Lys99= Single submitter Inborn genetic diseases
  • p.Phe135Leu Single submitter Inborn genetic diseases
  • p.Phe138= Single submitter Inborn genetic diseases
  • p.Phe138Leu Single submitter Inborn genetic diseases
  • p.Phe240= Single submitter Inborn genetic diseases
  • p.Phe275= Single submitter Inborn genetic diseases
  • p.Phe287= Single submitter Inborn genetic diseases
  • p.Phe358= Single submitter Inborn genetic diseases
  • p.Phe431= Single submitter Inborn genetic diseases
  • p.Phe441= Single submitter Inborn genetic diseases
  • p.Phe479= Single submitter Inborn genetic diseases
  • p.Phe48= Single submitter Inborn genetic diseases
  • p.Phe75= Single submitter Inborn genetic diseases
  • p.Pro108= Single submitter Inborn genetic diseases
  • p.Pro110= Single submitter Inborn genetic diseases
  • p.Pro113= Single submitter Inborn genetic diseases
  • p.Pro116= Single submitter Inborn genetic diseases
  • p.Pro126= Single submitter Inborn genetic diseases
  • p.Pro127= Single submitter Inborn genetic diseases
  • p.Pro129= Single submitter Inborn genetic diseases
  • p.Pro130= Single submitter Inborn genetic diseases
  • p.Pro15Ser Single submitter Inborn genetic diseases
  • p.Pro163= Single submitter Inborn genetic diseases
  • p.Pro163Ala Single submitter Inborn genetic diseases
  • p.Pro166= Single submitter Inborn genetic diseases
  • p.Pro173= Single submitter Inborn genetic diseases
  • p.Pro176= Single submitter Inborn genetic diseases
  • p.Pro184= Single submitter Inborn genetic diseases
  • p.Pro19= Single submitter Inborn genetic diseases
  • p.Pro193= Single submitter Inborn genetic diseases
  • p.Pro228= Single submitter Inborn genetic diseases
  • p.Pro23= Single submitter Inborn genetic diseases
  • p.Pro230= Single submitter Inborn genetic diseases
  • p.Pro230Ser Single submitter Inborn genetic diseases ⚠
  • p.Pro233= Single submitter Inborn genetic diseases
  • p.Pro242Ser Single submitter ⚠
  • p.Pro248= Single submitter Inborn genetic diseases
  • p.Pro320= Single submitter Inborn genetic diseases
  • p.Pro325= Single submitter Inborn genetic diseases
  • p.Pro344= Single submitter Inborn genetic diseases
  • p.Pro350= Single submitter Inborn genetic diseases
  • p.Pro363= Single submitter Inborn genetic diseases
  • p.Pro368= Single submitter Inborn genetic diseases
  • p.Pro4= Single submitter Inborn genetic diseases
  • p.Pro432= Single submitter Inborn genetic diseases
  • p.Pro445= Single submitter Inborn genetic diseases
  • p.Pro447= Single submitter Inborn genetic diseases
  • p.Pro478= Single submitter Inborn genetic diseases
  • p.Pro482Ser Single submitter Inborn genetic diseases
  • p.Pro507= Single submitter Inborn genetic diseases
  • p.Pro522= Single submitter Inborn genetic diseases
  • p.Pro53= Single submitter Inborn genetic diseases
  • p.Pro530= Single submitter Inborn genetic diseases
  • p.Pro532= Single submitter Inborn genetic diseases
  • p.Pro57= Single submitter Inborn genetic diseases
  • p.Pro574= Single submitter Inborn genetic diseases
  • p.Pro96= Single submitter Inborn genetic diseases
  • p.Pro97= Single submitter Inborn genetic diseases
  • p.Ser10= Single submitter Inborn genetic diseases
  • p.Ser103= Single submitter Inborn genetic diseases
  • p.Ser13= Single submitter Inborn genetic diseases
  • p.Ser134= Single submitter Inborn genetic diseases
  • p.Ser141= Single submitter Inborn genetic diseases
  • p.Ser150= Single submitter Inborn genetic diseases
  • p.Ser18= Single submitter Inborn genetic diseases
  • p.Ser186= Single submitter Inborn genetic diseases
  • p.Ser186Ile Single submitter
  • p.Ser210= Single submitter Inborn genetic diseases
  • p.Ser213= Single submitter Inborn genetic diseases
  • p.Ser245= Single submitter Inborn genetic diseases
  • p.Ser256= Single submitter Inborn genetic diseases
  • p.Ser27= Single submitter Inborn genetic diseases
  • p.Ser303= Single submitter Inborn genetic diseases
  • p.Ser326= Single submitter Inborn genetic diseases
  • p.Ser328= Single submitter Inborn genetic diseases
  • p.Ser330= Single submitter Inborn genetic diseases
  • p.Ser334= Single submitter Inborn genetic diseases
  • p.Ser360= Single submitter Inborn genetic diseases
  • p.Ser394= Single submitter Inborn genetic diseases
  • p.Ser433= Single submitter Inborn genetic diseases
  • p.Ser444= Single submitter Inborn genetic diseases
  • p.Ser459= Single submitter Inborn genetic diseases
  • p.Ser466= Single submitter Inborn genetic diseases
  • p.Ser480= Single submitter Inborn genetic diseases
  • p.Ser486= Single submitter Inborn genetic diseases
  • p.Ser494= Single submitter Inborn genetic diseases
  • p.Ser531= Single submitter Inborn genetic diseases
  • p.Ser538= Single submitter Inborn genetic diseases
  • p.Ser553= Single submitter Inborn genetic diseases
  • p.Ser64= Single submitter Inborn genetic diseases
  • p.Ter576= Single submitter Inborn genetic diseases
  • p.Thr159= Single submitter Inborn genetic diseases
  • p.Thr165= Single submitter Inborn genetic diseases
  • p.Thr165Ala Single submitter Inborn genetic diseases
  • p.Thr172= Single submitter Inborn genetic diseases
  • p.Thr264= Single submitter Inborn genetic diseases
  • p.Thr274= Single submitter Inborn genetic diseases
  • p.Thr306= Single submitter Inborn genetic diseases
  • p.Thr313= Single submitter Inborn genetic diseases
  • p.Thr327= Single submitter Inborn genetic diseases
  • p.Thr335= Single submitter Inborn genetic diseases
  • p.Thr355= Single submitter Inborn genetic diseases
  • p.Thr396= Single submitter Inborn genetic diseases
  • p.Thr474= Single submitter Inborn genetic diseases
  • p.Thr573= Single submitter Inborn genetic diseases
  • p.Tyr273= Single submitter Inborn genetic diseases
  • p.Tyr362= Single submitter Inborn genetic diseases
  • p.Tyr401= Single submitter Inborn genetic diseases
  • p.Tyr555= Single submitter Inborn genetic diseases
  • p.Tyr74= Single submitter Inborn genetic diseases

Uncertain significance 681

Showing the top 300 by review status; the full set is in the sitemap.