TIA1 — 335 ClinVar variants

All ClinVar germline TIA1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 120 flagged for review →

1 Pathogenic/Likely pathogenic · 5 Conflicting · 32 Benign · 9 Benign/Likely benign · 131 Likely benign · 157 Uncertain significance

Full TIA1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 120

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors vs ClinVar 1

ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.

Predictors agree, ClinVar conflicts 4

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 90

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 25

The independent predictors disagree with each other — read with care.

All TIA1 variants

Pathogenic/Likely pathogenic 1

Conflicting classifications of pathogenicity 5

  • c.474+15_474+17dup Single submitter distal myopathy, Welander type
  • p.Asn357Ser Single submitter amyotrophic lateral sclerosis 26 with or without frontotemporal dementia ⚠
  • p.Gly336Ser Single submitter distal myopathy, Welander type ⚠
  • p.Pro362Leu Single submitter distal myopathy, Welander type ⚠
  • p.Thr95Ser Single submitter distal myopathy, Welander type ⚠

Benign 32

Benign/Likely benign 9

  • c.223-3del Multiple submitters distal myopathy, Welander type
  • c.223-3dup Multiple submitters distal myopathy, Welander type
  • c.679+18G>T Multiple submitters distal myopathy, Welander type
  • p.Ala316Gly Multiple submitters distal myopathy, Welander type
  • p.Gln308= Multiple submitters distal myopathy, Welander type
  • p.Gln318Arg Multiple submitters distal myopathy, Welander type
  • p.Gln374= Multiple submitters distal myopathy, Welander type
  • p.Pro362= Multiple submitters distal myopathy, Welander type
  • p.Tyr10= Multiple submitters distal myopathy, Welander type

Likely benign 131

  • c.1035-7C>T Multiple submitters distal myopathy, Welander type
  • c.223-34G>A Multiple submitters
  • c.277+27A>G Multiple submitters
  • c.474+184C>T Multiple submitters
  • c.475-8C>T Multiple submitters distal myopathy, Welander type
  • c.680-16G>T Multiple submitters distal myopathy, Welander type
  • c.-166C>T Multiple submitters
  • p.Ala135= Multiple submitters distal myopathy, Welander type
  • p.Arg16= Multiple submitters distal myopathy, Welander type
  • p.Gly326= Multiple submitters distal myopathy, Welander type
  • p.Leu63= Multiple submitters distal myopathy, Welander type
  • p.Phe246= Multiple submitters distal myopathy, Welander type
  • p.Pro128= Multiple submitters distal myopathy, Welander type
  • p.Tyr306= Multiple submitters distal myopathy, Welander type
  • p.Val152= Multiple submitters distal myopathy, Welander type
  • c.1034+20T>C Single submitter distal myopathy, Welander type
  • c.1035-13C>T Single submitter distal myopathy, Welander type
  • c.1035-14A>G Single submitter distal myopathy, Welander type
  • c.1035-15C>A Single submitter distal myopathy, Welander type
  • c.1035-20T>G Single submitter distal myopathy, Welander type
  • c.1035-6C>A Single submitter distal myopathy, Welander type
  • c.1035-8T>C Single submitter distal myopathy, Welander type
  • c.1035-9C>G Single submitter distal myopathy, Welander type
  • c.123+15C>G Single submitter distal myopathy, Welander type
  • c.123+7G>A Single submitter distal myopathy, Welander type
  • c.123+94T>C Single submitter
  • c.124-14T>G Single submitter distal myopathy, Welander type
  • c.124-7C>T Single submitter distal myopathy, Welander type
  • c.222+103del Single submitter
  • c.222+11G>A Single submitter distal myopathy, Welander type
  • c.222+11G>T Single submitter distal myopathy, Welander type
  • c.222+19_222+22del Single submitter distal myopathy, Welander type
  • c.223-14T>A Single submitter distal myopathy, Welander type
  • c.223-15A>T Single submitter distal myopathy, Welander type
  • c.223-16A>C Single submitter distal myopathy, Welander type
  • c.223-4T>G Single submitter distal myopathy, Welander type
  • c.26+122C>T Single submitter
  • c.26+17G>A Single submitter distal myopathy, Welander type
  • c.26+7C>G Single submitter distal myopathy, Welander type
  • c.27-11T>C Single submitter distal myopathy, Welander type
  • c.27-13C>G Single submitter distal myopathy, Welander type
  • c.27-13C>T Single submitter distal myopathy, Welander type
  • c.277+12T>A Single submitter distal myopathy, Welander type
  • c.277+14dup Single submitter distal myopathy, Welander type
  • c.277+15T>C Single submitter distal myopathy, Welander type
  • c.277+7A>G Single submitter distal myopathy, Welander type
  • c.278-17C>G Single submitter distal myopathy, Welander type
  • c.310+12T>C Single submitter distal myopathy, Welander type
  • c.310+14_310+16del Single submitter distal myopathy, Welander type
  • c.310+17_310+18insC Single submitter distal myopathy, Welander type
  • c.310+19A>G Single submitter distal myopathy, Welander type
  • c.311-10C>T Single submitter distal myopathy, Welander type
  • c.311-11C>T Single submitter distal myopathy, Welander type
  • c.311-20C>T Single submitter distal myopathy, Welander type
  • c.311-8C>G Single submitter distal myopathy, Welander type
  • c.398+10A>G Single submitter distal myopathy, Welander type
  • c.398+11_398+12del Single submitter distal myopathy, Welander type
  • c.398+17A>G Single submitter
  • c.399-14G>T Single submitter distal myopathy, Welander type
  • c.399-19T>G Single submitter distal myopathy, Welander type
  • c.474+10G>T Single submitter distal myopathy, Welander type
  • c.474+11T>C Single submitter distal myopathy, Welander type
  • c.474+17G>A Single submitter distal myopathy, Welander type
  • c.475-12_475-10del Single submitter distal myopathy, Welander type
  • c.583+7G>A Single submitter distal myopathy, Welander type
  • c.584-20_584-19del Single submitter distal myopathy, Welander type
  • c.584-5A>C Single submitter distal myopathy, Welander type
  • c.584-5A>G Single submitter distal myopathy, Welander type
  • c.679+16C>G Single submitter distal myopathy, Welander type
  • c.679+7del Single submitter distal myopathy, Welander type
  • c.680-15dup Single submitter distal myopathy, Welander type
  • c.680-22_680-19del Single submitter distal myopathy, Welander type
  • c.680-5A>G Single submitter distal myopathy, Welander type
  • c.680-7C>G Single submitter distal myopathy, Welander type
  • c.764+10G>A Single submitter distal myopathy, Welander type
  • c.764+10G>T Single submitter distal myopathy, Welander type
  • c.765-104G>A Single submitter
  • c.765-14A>G Single submitter distal myopathy, Welander type
  • c.888+180A>T Single submitter
  • c.888+18T>C Single submitter distal myopathy, Welander type
  • c.889-14A>T Single submitter distal myopathy, Welander type
  • c.889-152T>G Single submitter
  • c.889-158_889-157insG Single submitter
  • c.889-15A>G Single submitter distal myopathy, Welander type
  • c.889-174T>C Single submitter
  • c.889-17T>C Single submitter distal myopathy, Welander type
  • c.-13G>A Single submitter
  • c.-158C>G Single submitter
  • p.Ala160= Single submitter distal myopathy, Welander type
  • p.Ala61= Single submitter
  • p.Arg231Ser Single submitter distal myopathy, Welander type ⚠
  • p.Arg69= Single submitter distal myopathy, Welander type
  • p.Asn162= Single submitter distal myopathy, Welander type
  • p.Asn180= Single submitter distal myopathy, Welander type
  • p.Asn67= Single submitter distal myopathy, Welander type
  • p.Asn79= Single submitter distal myopathy, Welander type
  • p.Cys281= Single submitter distal myopathy, Welander type
  • p.Gln304= Single submitter distal myopathy, Welander type
  • p.Gln317= Single submitter distal myopathy, Welander type
  • p.Gln361= Single submitter
  • p.Gly144= Single submitter distal myopathy, Welander type
  • p.Gly150= Single submitter distal myopathy, Welander type
  • p.Gly168= Single submitter distal myopathy, Welander type
  • p.Gly284= Single submitter distal myopathy, Welander type
  • p.Gly301= Single submitter distal myopathy, Welander type
  • p.Gly382= Single submitter distal myopathy, Welander type
  • p.His105= Single submitter
  • p.His107= Single submitter distal myopathy, Welander type
  • p.Leu113= Single submitter distal myopathy, Welander type
  • p.Leu14= Single submitter distal myopathy, Welander type
  • p.Lys147= Single submitter distal myopathy, Welander type
  • p.Lys249= Single submitter distal myopathy, Welander type
  • p.Lys88= Single submitter distal myopathy, Welander type
  • p.Phe126= Single submitter distal myopathy, Welander type
  • p.Phe253= Single submitter distal myopathy, Welander type
  • p.Phe344= Single submitter distal myopathy, Welander type
  • p.Phe53= Single submitter distal myopathy, Welander type
  • p.Pro187= Single submitter distal myopathy, Welander type
  • p.Pro189= Single submitter distal myopathy, Welander type
  • p.Pro305= Single submitter distal myopathy, Welander type
  • p.Ser15= Single submitter distal myopathy, Welander type
  • p.Ser201= Single submitter distal myopathy, Welander type
  • p.Thr215= Single submitter distal myopathy, Welander type
  • p.Tyr149= Single submitter distal myopathy, Welander type
  • p.Tyr193= Single submitter distal myopathy, Welander type
  • p.Tyr282= Single submitter distal myopathy, Welander type
  • p.Val108= Single submitter distal myopathy, Welander type
  • p.Val11= Single submitter distal myopathy, Welander type
  • p.Val205= Single submitter distal myopathy, Welander type
  • p.Val294= Single submitter distal myopathy, Welander type
  • p.Val76= Single submitter distal myopathy, Welander type

Uncertain significance 157