TSHB — 83 ClinVar variants
All ClinVar germline TSHB variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 29 flagged for review →
6 Pathogenic · 3 Pathogenic/Likely pathogenic · 3 Likely pathogenic · 1 Conflicting · 2 Benign · 4 Benign/Likely benign · 34 Likely benign · 30 Uncertain significance
Full TSHB gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 29
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors lean, ClinVar uncertain 22
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
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TSHB p.Ala100Thr
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
TSHB p.Arg54Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Arg75Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Asp55Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Cys125Arg
Uncertain significance
Single submitter
isolated thyroid-stimulating hormone deficiency
-
TSHB p.Cys125Tyr
Uncertain significance
Single submitter
isolated thyroid-stimulating hormone deficiency
-
TSHB p.Cys15Arg
Uncertain significance
Single submitter
isolated thyroid-stimulating hormone deficiency
- TSHB p.Cys47Trp Uncertain significance Single submitter
- TSHB p.His117Tyr Uncertain significance Single submitter
-
TSHB p.Ile84Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Met19Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Met29Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Met52Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Ser20Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Thr14Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Thr28Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Thr2Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Tyr124Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Tyr38His
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Val134Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Val134Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Val91Ala
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 7
The independent predictors disagree with each other — read with care.
-
TSHB p.Gly86Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
- TSHB p.Val99Ala Benign/Likely benign Multiple submitters
-
TSHB p.Ile46Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Pro85Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Thr53Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Tyr27His
Uncertain significance
Single submitter
Inborn genetic diseases
-
TSHB p.Val99Leu
Uncertain significance
Single submitter
Inborn genetic diseases
All TSHB variants
Pathogenic 6
- c.162+5G>A Multiple submitters isolated thyroid-stimulating hormone deficiency
- p.Cys125fs Multiple submitters isolated thyroid-stimulating hormone deficiency
- p.Asp76fs Single submitter
- p.Ile84fs Single submitter
- p.Leu10fs Single submitter
- p.Glu32Ter No assertion criteria isolated thyroid-stimulating hormone deficiency
Pathogenic/Likely pathogenic 3
- p.Gln69Ter Multiple submitters TSHB-related disorder
- p.Gly49Arg Multiple submitters isolated thyroid-stimulating hormone deficiency
- p.Phe77fs Multiple submitters isolated thyroid-stimulating hormone deficiency
Likely pathogenic 3
- p.Ala37fs Single submitter isolated thyroid-stimulating hormone deficiency
- p.Cys105Ter Single submitter isolated thyroid-stimulating hormone deficiency
- p.Met1_Thr2del Single submitter isolated thyroid-stimulating hormone deficiency
Conflicting classifications of pathogenicity 1
- c.*64T>C Single submitter isolated thyroid-stimulating hormone deficiency
Benign 2
- c.163-112C>G Single submitter
- c.-1-268A>G Single submitter
Benign/Likely benign 4
- c.162+16C>T Multiple submitters
- p.Arg75Gly Multiple submitters isolated thyroid-stimulating hormone deficiency
- p.Thr14Ala Multiple submitters isolated thyroid-stimulating hormone deficiency
- p.Val99Ala Multiple submitters ⚠
Likely benign 34
- c.163-4C>G Multiple submitters
- p.Ala18= Multiple submitters
- c.162+17A>G Single submitter
- c.162+18C>T Single submitter
- c.163-10C>G Single submitter
- c.163-15C>T Single submitter
- c.163-20C>T Single submitter
- c.163-4C>T Single submitter
- c.-13A>G Single submitter isolated thyroid-stimulating hormone deficiency
- p.Ala100= Single submitter
- p.Ala92= Single submitter
- p.Arg33= Single submitter
- p.Arg54= Single submitter
- p.Asn57= Single submitter
- p.Cys103= Single submitter
- p.Gly58= Single submitter
- p.Gly86= Single submitter
- p.His90= Single submitter
- p.Ile31= Single submitter
- p.Leu133= Single submitter
- p.Leu4= Single submitter
- p.Leu60= Single submitter
- p.Phe95= Single submitter
- p.Pro93= Single submitter
- p.Ser96= Single submitter
- p.Thr122= Single submitter
- p.Thr44= Single submitter
- p.Thr53= Single submitter
- p.Thr73= Single submitter
- p.Thr81= Single submitter
- p.Tyr27= Single submitter
- p.Tyr74= Single submitter
- p.Tyr79= Single submitter
- p.Val138= Single submitter
Uncertain significance 30
- p.Ala100Thr Multiple submitters Inborn genetic diseases ⚠
- p.Gly86Arg Multiple submitters Inborn genetic diseases ⚠
- p.Arg54Gln Single submitter Inborn genetic diseases ⚠
- p.Arg75Lys Single submitter Inborn genetic diseases ⚠
- p.Asp55Gly Single submitter Inborn genetic diseases ⚠
- p.Cys125Arg Single submitter isolated thyroid-stimulating hormone deficiency ⚠
- p.Cys125Tyr Single submitter isolated thyroid-stimulating hormone deficiency ⚠
- p.Cys15Arg Single submitter isolated thyroid-stimulating hormone deficiency ⚠
- p.Cys47Trp Single submitter ⚠
- p.His117Tyr Single submitter ⚠
- p.Ile46Phe Single submitter Inborn genetic diseases ⚠
- p.Ile84Met Single submitter Inborn genetic diseases ⚠
- p.Lys107Asn Single submitter Inborn genetic diseases
- p.Met19Thr Single submitter Inborn genetic diseases ⚠
- p.Met29Val Single submitter Inborn genetic diseases ⚠
- p.Met52Ile Single submitter Inborn genetic diseases ⚠
- p.Pro85Gln Single submitter Inborn genetic diseases ⚠
- p.Ser20Cys Single submitter Inborn genetic diseases ⚠
- p.Thr14Ile Single submitter Inborn genetic diseases ⚠
- p.Thr28Arg Single submitter Inborn genetic diseases ⚠
- p.Thr2Ser Single submitter Inborn genetic diseases ⚠
- p.Thr53Ala Single submitter Inborn genetic diseases ⚠
- p.Tyr124Asp Single submitter Inborn genetic diseases ⚠
- p.Tyr27His Single submitter Inborn genetic diseases ⚠
- p.Tyr38His Single submitter Inborn genetic diseases ⚠
- p.Val134Ala Single submitter Inborn genetic diseases ⚠
- p.Val134Leu Single submitter Inborn genetic diseases ⚠
- p.Val91Ala Single submitter Inborn genetic diseases ⚠
- p.Val99Leu Single submitter Inborn genetic diseases ⚠
- c.163-26T>C No assertion criteria TSHB-related disorder