TTC12 — 154 ClinVar variants
All ClinVar germline TTC12 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 85 flagged for review →
6 Pathogenic · 2 Conflicting · 34 Benign · 22 Likely benign · 90 Uncertain significance
Full TTC12 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 85
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 1
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
TTC12 p.Ile601Val
Conflicting
No assertion criteria
ciliary dyskinesia, primary, 45
Predictors lean, ClinVar uncertain 61
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
TTC12 p.Ala412Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala470Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala561Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala76Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg146Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg523Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn184Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn286Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn424Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn62Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn667Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asn696Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asp29His
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Asp29Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Cys325Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Cys471Arg
Uncertain significance
Single submitter
TTC12-related disorder
-
TTC12 p.Gln34His
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu461Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu494Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu49Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu520Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu598Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu679Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Gly623Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ile291Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu252Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu413Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu425Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu432Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu9Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Lys110Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Lys206Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Lys605Glu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met151Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met180Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met284Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met405Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met455Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met48Val
Uncertain significance
Single submitter
Inborn genetic diseases
- TTC12 p.Met503Leu Uncertain significance Single submitter
-
TTC12 p.Met65Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Phe512Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Pro511Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser130Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser326Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser522Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser545Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser615Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser616Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser703Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser81Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr144Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr251Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr547Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr59Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr698Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Tyr593Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Val192Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Val218Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Val622Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala389Val
Uncertain significance
No assertion criteria
TTC12-related disorder
Predictors split 23
The independent predictors disagree with each other — read with care.
-
TTC12 p.Ala116Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala558Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala639Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala668Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ala678Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg524Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg546Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg580Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Arg597Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Glu89Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Gly562Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu127Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu39Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu458Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu45Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Leu613Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met139Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Met633Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser28Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Ser360Arg
Uncertain significance
Single submitter
ciliary dyskinesia, primary, 45
-
TTC12 p.Ser641Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TTC12 p.Thr645Met
Conflicting
Single submitter
Inborn genetic diseases
-
TTC12 p.Tyr177Cys
Uncertain significance
Single submitter
Inborn genetic diseases
All TTC12 variants
Pathogenic 6
- p.Arg95Ter Single submitter Inborn genetic diseases
- p.Asp490fs Single submitter Reduced sperm motility
- c.1614+3A>T No assertion criteria ciliary dyskinesia, primary, 45
- p.Arg560Ter No assertion criteria ciliary dyskinesia, primary, 45
- p.Glu202_Ile203insTer No assertion criteria ciliary dyskinesia, primary, 45
- p.Met567Arg No assertion criteria ciliary dyskinesia, primary, 45
Conflicting classifications of pathogenicity 2
- p.Thr645Met Single submitter Inborn genetic diseases ⚠
- p.Ile601Val No assertion criteria ciliary dyskinesia, primary, 45 ⚠
Benign 34
- c.1247+24T>C Multiple submitters
- c.1446+205T>A Multiple submitters
- c.1446+55G>T Multiple submitters
- c.1447-150C>T Multiple submitters
- c.1546-62C>T Multiple submitters
- c.1615-64G>A Multiple submitters
- c.1717-79A>G Multiple submitters
- c.1717-84G>A Multiple submitters
- c.1816+126A>G Multiple submitters
- c.1816+30T>C Multiple submitters ciliary dyskinesia, primary, 45
- c.1817-138A>G Multiple submitters
- c.1817-92G>A Multiple submitters
- c.2042+82A>G Multiple submitters
- c.322+191A>G Multiple submitters
- c.445-84A>G Multiple submitters
- c.504+30A>G Multiple submitters
- c.504+8G>A Multiple submitters ciliary dyskinesia, primary, 45
- c.577-68C>G Multiple submitters
- c.59-34T>C Multiple submitters
- c.59-47C>G Multiple submitters
- c.827-16T>G Multiple submitters ciliary dyskinesia, primary, 45
- c.827-57G>T Multiple submitters
- c.897-6T>C Multiple submitters
- c.-15-189G>A Multiple submitters
- c.-15-86C>T Multiple submitters
- p.Met73Leu Multiple submitters ciliary dyskinesia, primary, 45
- c.1446+2T>C Single submitter
- c.1614+198A>G Single submitter
- c.1614+44TTGTT[10] Single submitter
- c.1614+44TTGTT[9] Single submitter
- c.222+156del Single submitter
- c.59-167del Single submitter
- c.59-167dup Single submitter
- c.59-174A>C Single submitter
Likely benign 22
- p.Thr590= Multiple submitters
- c.1546-12C>G Single submitter
- c.2042+6C>G Single submitter
- c.58+11G>A Single submitter
- c.826+8A>G Single submitter
- c.-4C>T Single submitter
- p.Arg128His Single submitter Inborn genetic diseases
- p.Asn286Asp Single submitter Inborn genetic diseases
- p.Ile126Val Single submitter Inborn genetic diseases
- p.Leu109= Single submitter
- p.Leu260= Single submitter
- p.Leu47Phe Single submitter Inborn genetic diseases
- p.Ser397= Single submitter
- p.Ser608Gly Single submitter Inborn genetic diseases
- p.Ser657Gly Single submitter Inborn genetic diseases
- p.Thr659Ala Single submitter Inborn genetic diseases
- p.Tyr593= Single submitter
- p.Val317= Single submitter
- p.Val563= Single submitter
- c.59-4C>G No assertion criteria TTC12-related disorder
- p.His690= No assertion criteria TTC12-related disorder
- p.Leu571= No assertion criteria TTC12-related disorder
Uncertain significance 90
- c.245-2A>G Single submitter Inborn genetic diseases
- c.322+3A>T Single submitter
- p.Ala116Thr Single submitter Inborn genetic diseases ⚠
- p.Ala412Thr Single submitter Inborn genetic diseases ⚠
- p.Ala470Asp Single submitter Inborn genetic diseases ⚠
- p.Ala558Asp Single submitter Inborn genetic diseases ⚠
- p.Ala561Thr Single submitter Inborn genetic diseases ⚠
- p.Ala639Val Single submitter Inborn genetic diseases ⚠
- p.Ala668Thr Single submitter Inborn genetic diseases ⚠
- p.Ala678Thr Single submitter Inborn genetic diseases ⚠
- p.Ala76Thr Single submitter Inborn genetic diseases ⚠
- p.Arg146Gln Single submitter Inborn genetic diseases ⚠
- p.Arg523Gly Single submitter Inborn genetic diseases ⚠
- p.Arg524Trp Single submitter Inborn genetic diseases ⚠
- p.Arg546Trp Single submitter Inborn genetic diseases ⚠
- p.Arg580Cys Single submitter Inborn genetic diseases ⚠
- p.Arg597Pro Single submitter Inborn genetic diseases ⚠
- p.Arg597Trp Single submitter Inborn genetic diseases
- p.Asn184Ser Single submitter Inborn genetic diseases ⚠
- p.Asn286Ser Single submitter Inborn genetic diseases ⚠
- p.Asn424Ser Single submitter Inborn genetic diseases ⚠
- p.Asn62Ser Single submitter Inborn genetic diseases ⚠
- p.Asn667Thr Single submitter Inborn genetic diseases ⚠
- p.Asn696Ser Single submitter Inborn genetic diseases ⚠
- p.Asp29His Single submitter Inborn genetic diseases ⚠
- p.Asp29Val Single submitter Inborn genetic diseases ⚠
- p.Cys196Tyr Single submitter Inborn genetic diseases
- p.Cys325Trp Single submitter Inborn genetic diseases ⚠
- p.Cys471Arg Single submitter TTC12-related disorder ⚠
- p.Gln34His Single submitter Inborn genetic diseases ⚠
- p.Glu461Lys Single submitter Inborn genetic diseases ⚠
- p.Glu494Gly Single submitter Inborn genetic diseases ⚠
- p.Glu49Lys Single submitter Inborn genetic diseases ⚠
- p.Glu520Lys Single submitter Inborn genetic diseases ⚠
- p.Glu598Lys Single submitter Inborn genetic diseases ⚠
- p.Glu679Val Single submitter Inborn genetic diseases ⚠
- p.Glu89Lys Single submitter Inborn genetic diseases ⚠
- p.Gly562Arg Single submitter Inborn genetic diseases ⚠
- p.Gly575del Single submitter ciliary dyskinesia, primary, 45
- p.Gly623Asp Single submitter Inborn genetic diseases ⚠
- p.Ile291Val Single submitter Inborn genetic diseases ⚠
- p.Leu127Pro Single submitter Inborn genetic diseases ⚠
- p.Leu252Pro Single submitter Inborn genetic diseases ⚠
- p.Leu39Pro Single submitter Inborn genetic diseases ⚠
- p.Leu413Arg Single submitter Inborn genetic diseases ⚠
- p.Leu425Ile Single submitter Inborn genetic diseases ⚠
- p.Leu432Pro Single submitter Inborn genetic diseases ⚠
- p.Leu458Val Single submitter Inborn genetic diseases ⚠
- p.Leu45Arg Single submitter Inborn genetic diseases ⚠
- p.Leu508Pro Single submitter Inborn genetic diseases
- p.Leu613Val Single submitter Inborn genetic diseases ⚠
- p.Leu9Trp Single submitter Inborn genetic diseases ⚠
- p.Lys110Arg Single submitter Inborn genetic diseases ⚠
- p.Lys206Asn Single submitter Inborn genetic diseases ⚠
- p.Lys605Glu Single submitter Inborn genetic diseases ⚠
- p.Met139Ile Single submitter Inborn genetic diseases ⚠
- p.Met151Val Single submitter Inborn genetic diseases ⚠
- p.Met180Ile Single submitter Inborn genetic diseases ⚠
- p.Met284Lys Single submitter Inborn genetic diseases ⚠
- p.Met405Leu Single submitter Inborn genetic diseases ⚠
- p.Met455Ile Single submitter Inborn genetic diseases ⚠
- p.Met48Val Single submitter Inborn genetic diseases ⚠
- p.Met503Leu Single submitter ⚠
- p.Met633Arg Single submitter Inborn genetic diseases ⚠
- p.Met65Thr Single submitter Inborn genetic diseases ⚠
- p.Phe512Ser Single submitter Inborn genetic diseases ⚠
- p.Pro511Leu Single submitter Inborn genetic diseases ⚠
- p.Ser130Ile Single submitter Inborn genetic diseases ⚠
- p.Ser28Phe Single submitter Inborn genetic diseases ⚠
- p.Ser326Gly Single submitter Inborn genetic diseases ⚠
- p.Ser360Arg Single submitter ciliary dyskinesia, primary, 45 ⚠
- p.Ser522Asn Single submitter Inborn genetic diseases ⚠
- p.Ser545Arg Single submitter Inborn genetic diseases ⚠
- p.Ser615Arg Single submitter Inborn genetic diseases ⚠
- p.Ser616Leu Single submitter Inborn genetic diseases ⚠
- p.Ser641Pro Single submitter Inborn genetic diseases ⚠
- p.Ser703Arg Single submitter Inborn genetic diseases ⚠
- p.Ser81Thr Single submitter Inborn genetic diseases ⚠
- p.Thr144Ile Single submitter Inborn genetic diseases ⚠
- p.Thr251Asn Single submitter Inborn genetic diseases ⚠
- p.Thr547Ser Single submitter Inborn genetic diseases ⚠
- p.Thr59Ile Single submitter Inborn genetic diseases ⚠
- p.Thr698Met Single submitter Inborn genetic diseases ⚠
- p.Tyr177Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr581Cys Single submitter Inborn genetic diseases
- p.Tyr593Ser Single submitter Inborn genetic diseases ⚠
- p.Val192Met Single submitter Inborn genetic diseases ⚠
- p.Val218Ala Single submitter Inborn genetic diseases ⚠
- p.Val622Ala Single submitter Inborn genetic diseases ⚠
- p.Ala389Val No assertion criteria TTC12-related disorder ⚠