TUBB — 133 ClinVar variants
All ClinVar germline TUBB variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 63 flagged for review →
10 Pathogenic · 5 Pathogenic/Likely pathogenic · 26 Likely pathogenic · 5 Conflicting · 11 Benign · 1 Benign/Likely benign · 13 Likely benign · 62 Uncertain significance
Full TUBB gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 63
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors vs ClinVar 6
ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.
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TUBB p.Asn52Ser
Pathogenic/Likely pathogenic
Multiple submitters
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Val353Ile
Pathogenic/Likely pathogenic
Multiple submitters
skin creases, congenital symmetric circumferential, 1
-
TUBB p.Ile47Val
Likely pathogenic
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Pro287Ser Pathogenic Single submitter
- TUBB p.Lys216Arg Likely pathogenic No assertion criteria
-
TUBB p.Tyr222Phe
Pathogenic
No assertion criteria
skin creases, congenital symmetric circumferential, 1
Predictors agree, ClinVar conflicts 4
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
-
TUBB p.Arg121Trp
Conflicting
Single submitter
skin creases, congenital symmetric circumferential, 1
-
TUBB p.Arg77Cys
Conflicting
Single submitter
TUBB-related disorder
-
TUBB p.Asp118Tyr
Conflicting
Single submitter
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Pro287Leu
Conflicting
Single submitter
complex cortical dysplasia with other brain malformations 6
Predictors lean, ClinVar uncertain 41
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
TUBB p.Arg213Cys
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
TUBB p.Asn100Ser
Uncertain significance
Multiple submitters
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Glu434Asp
Uncertain significance
Multiple submitters
Inborn genetic diseases
-
TUBB p.Gly277Glu
Uncertain significance
Multiple submitters
TUBB-related disorder
-
TUBB p.Gly82Arg
Uncertain significance
Multiple submitters
Inborn genetic diseases
- TUBB p.Lys58Arg Uncertain significance Multiple submitters
- TUBB p.Met330Val Uncertain significance Multiple submitters
- TUBB p.Arg162Cys Uncertain significance Single submitter
-
TUBB p.Arg162His
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Arg162Pro Uncertain significance Single submitter
- TUBB p.Arg282Gln Uncertain significance Single submitter
- TUBB p.Arg390Cys Uncertain significance Single submitter
-
TUBB p.Asn89Thr
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Gln291His Uncertain significance Single submitter
- TUBB p.Gln94Leu Uncertain significance Single submitter
-
TUBB p.Glu198Gly
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Glu442Asp Uncertain significance Single submitter
-
TUBB p.Gly141Arg
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Gly148Ala
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Gly17Val Uncertain significance Single submitter
-
TUBB p.Gly400Arg
Uncertain significance
Single submitter
congenital fibrosis of extraocular muscles
- TUBB p.His307Leu Uncertain significance Single submitter
-
TUBB p.Leu187His
Uncertain significance
Single submitter
TUBB-related tubulinopathy
-
TUBB p.Leu240Ile
Uncertain significance
Single submitter
Inborn genetic diseases
- TUBB p.Leu240Pro Uncertain significance Single submitter
-
TUBB p.Lys19Thr
Uncertain significance
Single submitter
Inborn genetic diseases
- TUBB p.Met147Thr Uncertain significance Single submitter
-
TUBB p.Met267Ile
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Ser115Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TUBB p.Ser275Asn
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Ser275Thr Uncertain significance Single submitter
- TUBB p.Thr178Ala Uncertain significance Single submitter
- TUBB p.Thr290Ser Uncertain significance Single submitter
- TUBB p.Thr312Ala Uncertain significance Single submitter
- TUBB p.Thr386Ile Uncertain significance Single submitter
- TUBB p.Tyr51Cys Uncertain significance Single submitter
- TUBB p.Tyr59Cys Uncertain significance Single submitter
-
TUBB p.Val169Ala
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
-
TUBB p.Ala97Thr
Uncertain significance
No assertion criteria
TUBB-related disorder
-
TUBB p.Gly223Arg
Uncertain significance
No assertion criteria
complex cortical dysplasia with other brain malformations 6
- TUBB p.Val193Ala Uncertain significance No assertion criteria
Predictors split 12
The independent predictors disagree with each other — read with care.
- TUBB p.Leu44Val Uncertain significance Single submitter
- TUBB p.Met321Leu Uncertain significance Single submitter
-
TUBB p.Met321Val
Conflicting
Single submitter
Abnormal brain morphology
- TUBB p.Met323Thr Likely pathogenic Single submitter
- TUBB p.Thr178Ser Likely pathogenic Single submitter
- TUBB p.Thr221Ala Uncertain significance Single submitter
-
TUBB p.Thr237Ser
Uncertain significance
Single submitter
complex cortical dysplasia with other brain malformations 6
- TUBB p.Thr386Ala Uncertain significance Single submitter
- TUBB p.Val293Phe Likely pathogenic Single submitter
- TUBB p.Val333Met Uncertain significance Single submitter
-
TUBB p.Val349Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TUBB p.Asp31Asn
Likely pathogenic
No assertion criteria
complex cortical dysplasia with other brain malformations 6
All TUBB variants
Pathogenic 10
- p.Glu401Lys Multiple submitters Inborn genetic diseases
- p.Met299Val Multiple submitters Inborn genetic diseases
- p.Asp209Gly Single submitter complex cortical dysplasia with other brain malformations 6
- p.Cys239Ser Single submitter
- p.Ile210fs Single submitter TUBB3-related tubulinopathy
- p.Pro287Ser Single submitter ⚠
- p.Thr290Ile Single submitter complex cortical dysplasia with other brain malformations 6
- p.Gln15Lys No assertion criteria skin creases, congenital symmetric circumferential, 1
- p.Glu421Lys No assertion criteria complex cortical dysplasia with other brain malformations 6
- p.Tyr222Phe No assertion criteria skin creases, congenital symmetric circumferential, 1 ⚠
Pathogenic/Likely pathogenic 5
- p.Asn52Ser Multiple submitters complex cortical dysplasia with other brain malformations 6 ⚠
- p.Asp327Asn Multiple submitters Inborn genetic diseases
- p.Glu111Lys Multiple submitters complex cortical dysplasia with other brain malformations 6
- p.Thr221Ile Multiple submitters complex cortical dysplasia with other brain malformations 6
- p.Val353Ile Multiple submitters skin creases, congenital symmetric circumferential, 1 ⚠
Likely pathogenic 26
- p.Gln15His Multiple submitters Inborn genetic diseases
- p.Arg251Leu Single submitter
- p.Arg306Pro Single submitter complex cortical dysplasia with other brain malformations 6
- p.Asp224His Single submitter complex cortical dysplasia with other brain malformations 6
- p.Asp224Tyr Single submitter complex cortical dysplasia with other brain malformations 6
- p.Glu108Lys Single submitter
- p.Glu410Asp Single submitter
- p.Gly142Cys Single submitter
- p.Gly82Val Single submitter complex cortical dysplasia with other brain malformations 6
- p.His227Arg Single submitter
- p.Ile47Val Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Leu150Phe Single submitter complex cortical dysplasia with other brain malformations 6
- p.Leu228Ile Single submitter
- p.Leu228Val Single submitter
- p.Leu361Phe Single submitter Ventriculomegaly
- p.Leu68Ile Single submitter
- p.Met299Ile Single submitter
- p.Met323Thr Single submitter ⚠
- p.Met73Thr Single submitter TUBB-related disorder
- p.Pro160Leu Single submitter TUBB-related disorder
- p.Pro87Leu Single submitter complex cortical dysplasia with other brain malformations 6
- p.Thr178Ser Single submitter ⚠
- p.Tyr106Asp Single submitter complex cortical dysplasia with other brain malformations 6
- p.Val293Phe Single submitter ⚠
- p.Asp31Asn No assertion criteria complex cortical dysplasia with other brain malformations 6 ⚠
- p.Lys216Arg No assertion criteria ⚠
Conflicting classifications of pathogenicity 5
- p.Arg121Trp Single submitter skin creases, congenital symmetric circumferential, 1 ⚠
- p.Arg77Cys Single submitter TUBB-related disorder ⚠
- p.Asp118Tyr Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Met321Val Single submitter Abnormal brain morphology ⚠
- p.Pro287Leu Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
Benign 11
- c.167-60G>A Single submitter
- c.277+11C>T Single submitter
- c.277+133C>T Single submitter
- c.57+235G>C Single submitter
- c.57+87G>T Single submitter
- c.58-49A>T Single submitter
- c.*127del Single submitter
- c.*127dup Single submitter
- c.*56G>T Single submitter
- c.*57C>T Single submitter
- p.Leu217= Single submitter
Benign/Likely benign 1
- p.Tyr222= Multiple submitters
Likely benign 13
- c.58-213T>A Multiple submitters
- c.58-301G>A Multiple submitters
- p.Gly400= Multiple submitters
- c.277+15T>C Single submitter
- c.57+21_57+22del Single submitter
- c.58-145G>A Single submitter
- c.58-567A>G Single submitter
- c.58-9C>T Single submitter
- c.*122_*123insC Single submitter
- p.Gly437Ser Single submitter
- p.His396= Single submitter
- p.Val333= Single submitter
- p.Val419= Single submitter
Uncertain significance 62
- p.Ala54Val Multiple submitters skin creases, congenital symmetric circumferential, 1
- p.Arg213Cys Multiple submitters Inborn genetic diseases ⚠
- p.Asn100Ser Multiple submitters complex cortical dysplasia with other brain malformations 6 ⚠
- p.Glu434Asp Multiple submitters Inborn genetic diseases ⚠
- p.Gly277Glu Multiple submitters TUBB-related disorder ⚠
- p.Gly82Arg Multiple submitters Inborn genetic diseases ⚠
- p.Lys58Arg Multiple submitters ⚠
- p.Met330Val Multiple submitters ⚠
- p.Tyr200Cys Multiple submitters complex cortical dysplasia with other brain malformations 6
- c.167-1_176del Single submitter
- p.Ala315fs Single submitter
- p.Ala315Val Single submitter
- p.Arg156Ter Single submitter
- p.Arg162Cys Single submitter ⚠
- p.Arg162His Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Arg162Pro Single submitter ⚠
- p.Arg282Gln Single submitter ⚠
- p.Arg390Cys Single submitter ⚠
- p.Asn89Thr Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Asp249Val Single submitter Inborn genetic diseases
- p.Gln291His Single submitter ⚠
- p.Gln94fs Single submitter
- p.Gln94Leu Single submitter ⚠
- p.Glu198Gly Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Glu442Asp Single submitter ⚠
- p.Gly141Arg Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Gly148Ala Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Gly17Val Single submitter ⚠
- p.Gly400Arg Single submitter congenital fibrosis of extraocular muscles ⚠
- p.His307Leu Single submitter ⚠
- p.Leu187His Single submitter TUBB-related tubulinopathy ⚠
- p.Leu207_Tyr208insTer Single submitter complex cortical dysplasia with other brain malformations 6
- p.Leu240Ile Single submitter Inborn genetic diseases ⚠
- p.Leu240Phe Single submitter
- p.Leu240Pro Single submitter ⚠
- p.Leu44Val Single submitter ⚠
- p.Lys19Thr Single submitter Inborn genetic diseases ⚠
- p.Lys58Thr Single submitter
- p.Met147Thr Single submitter ⚠
- p.Met267Ile Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Met321Leu Single submitter ⚠
- p.Ser115Ala Single submitter Inborn genetic diseases ⚠
- p.Ser275Asn Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Ser275Thr Single submitter ⚠
- p.Ser75fs Single submitter
- p.Thr178Ala Single submitter ⚠
- p.Thr221Ala Single submitter ⚠
- p.Thr237Ser Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Thr285fs Single submitter complex cortical dysplasia with other brain malformations 6
- p.Thr290Ser Single submitter ⚠
- p.Thr312Ala Single submitter ⚠
- p.Thr386Ala Single submitter ⚠
- p.Thr386Ile Single submitter ⚠
- p.Tyr425Ter Single submitter
- p.Tyr51Cys Single submitter ⚠
- p.Tyr59Cys Single submitter ⚠
- p.Val169Ala Single submitter complex cortical dysplasia with other brain malformations 6 ⚠
- p.Val333Met Single submitter ⚠
- p.Val349Ile Single submitter Inborn genetic diseases ⚠
- p.Ala97Thr No assertion criteria TUBB-related disorder ⚠
- p.Gly223Arg No assertion criteria complex cortical dysplasia with other brain malformations 6 ⚠
- p.Val193Ala No assertion criteria ⚠