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REL p.Cys304fs

c.910_911del · rs2466286557 · VCV2709063

Pathogenic Single submitter
Classification
Pathogenic
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 1 submitter
Consequence
frameshift
predicted LoF
gnomAD v4.1
Not reported
no gnomAD frequency available for this variant

Computational evidence

Protein change
Missense predictors do not apply to this variant type; conservation carries the signal.
Consequenceframeshiftpredicted loss-of-function in a LoF-intolerant gene
NMDpredictedpremature termination codon in exon 8 of 10
Splicing
SpliceAI—not assessed · substitutions only
Constraint at this position
ConservationphyloP -0.61GERP -2.6, phastCons 0.017

Predicted loss-of-function is descriptive, not an applied PVS1 code.

Population frequency

dbSNP / gnomAD

No gnomAD frequency available for this variant. This is missing data, not an absence: the variant may or may not be present in gnomAD. Rarity (ACMG PM2) and BA1/BS1 cannot be assessed for it.

Variant & gene context

Gene
REL
Protein
p.Cys304fs
Coding
c.910_911del
MANE Select
NM_001291746
dbSNP
rs2466286557
Type
Microsatellite
Location
chr2:60920095 (GRCh38)
Gene constraint
LOEUF 0.416 · pLI 1.00 (gnomAD)
Structure
AlphaFold pLDDT 66.46
Full REL gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/rel-p-cys304fs (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown