Send feedback

RYR2 p.Asp378=

c.1134C>T · rs193922621 · VCV36730

Benign/Likely benign Multiple submitters
Classification
Benign/Likely benign
ClinVar
Review
Multiple submitters ★★☆☆
ClinVar · 18 submitters
gnomAD v4.1
Rare
rare (popmax 0.105%, nfe)
Conditions
4
Cardiovascular phenotype

Computational evidence

Protein change
Missense predictors do not apply to this variant type; conservation carries the signal.
Splicing
SpliceAI—not assessed · no allele here is in the release
Constraint at this position
ConservationphyloP -1.1GERP -3.6, phastCons 0.003
Overall
CADD3.987PHRED · no single calibrated threshold — expert panels disagree

Population frequency

gnomAD v4.1 · exomes + genomes
Grpmax group 0.105% European (non-Finnish) · 1,224/1,170,182 alleles
Filtering AF 0.0997% ClinGen BA1/BS1 input FAF95, joint · FAF99 0.0977%
Overall 0.0831% 1,327/1,596,894 alleles · rare exomes 1,218/1,444,798 · genomes 109/152,096 · joint denominator
Ancestry group Frequency 1 in
European (non-Finnish)grpmax 0.105% 956
Remaining individualsnot grpmax-eligible 0.0518% 1,930
Finnishnot grpmax-eligible 0.0442% 2,262
Admixed American 0.0338% 2,956
Ashkenazi Jewishnot grpmax-eligible 0.0241% 4,146
South Asian 0.0103% 9,718
East Asian 0.00674% 14,841
African / African-American 0.00536% 18,644

Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.

Variant & gene context

Gene
RYR2
Protein
p.Asp378=
Coding
c.1134C>T
MANE Select
NM_001035
dbSNP
rs193922621
Type
single nucleotide variant
Location
chr1:237441447 (GRCh38)
Gene constraint
LOEUF 0.424 · pLI 1.00 · ClinGen HI 0/3 (gnomAD)
Residue 378
the mir 5 domain
Full RYR2 gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/ryr2-p-asp378 (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown