SCHEMBL1088538

SCHEMBL1088538

c1ccc(CN2CCCC[C@H](Nc3nccc(N4CCCCCC4)n3)C2)cc1

nearest known ligand 0.90

Predicted protein targets (top 17)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.90
HRH4 Q9H3N8 4/20 0.54
HRH3 Q9Y5N1 1/20 0.53
ACHE P22303 3/20 0.50
IDH1 O75874 3/20 0.49
EHMT2 Q96KQ7 1/20 0.49
KAT2B Q92831 2/20 0.48
MAPK10 P53779 1/20 0.47
OGA O60502 1/20 0.47
BACE1 P56817 2/20 0.46
ROCK2 O75116 1/20 0.46
CCR2 P41597 1/20 0.46
ROCK1 Q13464 1/20 0.46
CCNE1 P24864 1/20 0.46
CDK2 P24941 1/20 0.46
MAPK8 P45983 1/20 0.46
MAPK9 P45984 1/20 0.46

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1088764 1.00 CXCR4 (0.90) CXCR4HRH4HRH3ACHEIDH1
SCHEMBL1088952 0.98 CXCR4 (0.90) CXCR4HRH4HRH3ACHEIDH1
SCHEMBL1088216 0.98 CXCR4 (0.90) CXCR4HRH4HRH3ACHEIDH1
SCHEMBL1089706 0.98 CXCR4 (0.90) CXCR4HRH4HRH3ACHEIDH1
SCHEMBL1088830 0.95 CXCR4 (1.00) CXCR4HRH4HRH3ACHEEHMT2
SCHEMBL1089642 0.95 CXCR4 (1.00) CXCR4HRH4HRH3ACHEEHMT2
SCHEMBL1089258 0.95 CXCR4 (1.00) CXCR4HRH4HRH3ACHEEHMT2
SCHEMBL1089995 0.93 CXCR4 (0.81) CXCR4HRH4HRH3ACHEEHMT2
SCHEMBL1089573 0.91 CXCR4 (0.85) CXCR4HRH4HRH3ACHEIDH1
SCHEMBL1089520 0.90 CXCR4 (0.76) CXCR4HRH4HRH3ACHEEHMT2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885HRH3 94/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885HRH3 94/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885HRH3 94/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.