SCHEMBL1089236

SCHEMBL1089236

CCCCCCCC(=O)N1CCC(N2CCC(Nc3nccc(N4CCCCCC4)n3)C2)CC1

nearest known ligand 0.49

Predicted protein targets (top 18)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.49
HRH4 Q9H3N8 9/20 0.45
CCNK O75909 2/20 0.43
CDK12 Q9NYV4 2/20 0.43
MAPK8 P45983 3/20 0.42
CDK2 P24941 2/20 0.42
JUN P05412 1/20 0.42
MAPK9 P45984 1/20 0.42
MEN1 O00255 1/20 0.39
KMT2A Q03164 1/20 0.39
TDP1 Q9NUW8 1/20 0.39
L3MBTL1 Q9Y468 1/20 0.39
CDK1 P06493 1/20 0.39
CDK4 P11802 1/20 0.39
CCND1 P24385 1/20 0.39
CYP3A4 P08684 1/20 0.38
ACACB O00763 1/20 0.38
HRH3 Q9Y5N1 2/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1089651 1.00 CXCR4 (0.49) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090843 0.99 CXCR4 (0.49) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090434 0.97 CXCR4 (0.49) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090933 0.96 CCNK (0.46) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090894 0.96 HRH4 (0.48) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090554 0.96 HRH4 (0.48) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090139 0.96 CCNK (0.46) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1091308 0.95 HRH4 (0.47) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1090163 0.95 CCNK (0.47) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1089730 0.94 CXCR4 (0.51) CXCR4HRH4CCNKCDK12MAPK8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.