SCHEMBL1089430

SCHEMBL1089430

c1ccc2c(N3CCCC3)nc(NCCCN3CCOCC3)nc2c1

nearest known ligand 0.64

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
KDM4E B2RXH2 5/20 0.64
LMNA P02545 4/20 0.64
NPSR1 Q6W5P4 2/20 0.64
NPC1 O15118 1/20 0.64
GLA P06280 1/20 0.64
POLB P06746 1/20 0.64
GAA P10253 1/20 0.64
RAD52 P43351 1/20 0.64
RAB9A P51151 1/20 0.64
KMT2A Q03164 1/20 0.64
MAPK1 P28482 4/20 0.57
ALOX15 P16050 2/20 0.57
MRGPRX1 Q96LB2 1/20 0.57
TP53 P04637 1/20 0.57
TSHR P16473 1/20 0.57
ACP1 P24666 2/20 0.56
HRH3 Q9Y5N1 2/20 0.56
ALDH1A1 P00352 3/20 0.55
HPGD P15428 3/20 0.55
HTT P42858 2/20 0.55

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1089186 0.99 KDM4E (0.63) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1088592 0.99 KDM4E (0.63) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1088850 0.99 KDM4E (0.63) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1089550 0.93 MRGPRX1 (0.59) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1089867 0.92 MRGPRX1 (0.58) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1089070 0.92 MRGPRX1 (0.58) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1088997 0.92 MRGPRX1 (0.58) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1090556 0.92 HRH3 (0.63) KDM4ELMNANPSR1NPC1GLA
SCHEMBL1088939 0.91 HRH3 (0.65) KDM4ELMNANPSR1GLAPOLB
SCHEMBL1090472 0.91 HRH3 (0.65) KDM4ELMNANPSR1GLAPOLB

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 KDM4E 2001/4885LMNA 3658/4885NPSR1 84/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 KDM4E 2001/4885LMNA 3658/4885NPSR1 84/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 KDM4E 2001/4885LMNA 3658/4885NPSR1 84/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.