SCHEMBL1089633

SCHEMBL1089633

CCN(CC)c1ccc(CN2CCCC(Nc3nccc(N4CCCCCC4)n3)C2)cc1

nearest known ligand 0.67

Predicted protein targets (top 14)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.67
KDM4E B2RXH2 1/20 0.49
MEN1 O00255 1/20 0.49
ALDH1A1 P00352 1/20 0.49
GFER P55789 1/20 0.49
KMT2A Q03164 1/20 0.49
HRH4 Q9H3N8 4/20 0.47
CCNK O75909 1/20 0.44
CDK12 Q9NYV4 1/20 0.44
ROCK2 O75116 10/20 0.43
KAT2B Q92831 1/20 0.42
EHMT2 Q96KQ7 1/20 0.41
CCR2 P41597 2/20 0.39
ROCK1 Q13464 2/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1090780 0.95 CXCR4 (0.74) CXCR4KDM4EMEN1ALDH1A1GFER
SCHEMBL1089449 0.93 CXCR4 (0.64) CXCR4KDM4EMEN1ALDH1A1GFER
SCHEMBL1088899 0.91 CXCR4 (0.69) CXCR4ALDH1A1HRH4CCNKCDK12
SCHEMBL1090071 0.90 CXCR4 (0.64) CXCR4KDM4EMEN1ALDH1A1GFER
SCHEMBL1089908 0.86 CXCR4 (0.74) CXCR4KDM4EALDH1A1KMT2AHRH4
SCHEMBL1090549 0.86 CXCR4 (0.74) CXCR4HRH4CCNKCDK12ROCK2
SCHEMBL1089356 0.86 CXCR4 (0.76) CXCR4ALDH1A1HRH4ROCK2KAT2B
SCHEMBL1089312 0.85 CXCR4 (0.73) CXCR4HRH4CCNKCDK12ROCK2
SCHEMBL1088952 0.85 CXCR4 (0.90) CXCR4HRH4ROCK2KAT2BEHMT2
SCHEMBL1089706 0.85 CXCR4 (0.90) CXCR4HRH4ROCK2KAT2BEHMT2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885KDM4E 2001/4885MEN1 3648/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885KDM4E 2001/4885MEN1 3648/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885KDM4E 2001/4885MEN1 3648/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.