SCHEMBL1089692

SCHEMBL1089692

CCCN1CCC(N2CCC(Nc3nccc(N4CCCCCC4)n3)C2)CC1

nearest known ligand 0.60

Predicted protein targets (top 12)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.60
HRH4 Q9H3N8 16/20 0.51
CCNK O75909 1/20 0.41
CDK12 Q9NYV4 1/20 0.41
HRH3 Q9Y5N1 1/20 0.39
CDK1 P06493 1/20 0.38
CDK4 P11802 1/20 0.38
CCNA2 P20248 1/20 0.38
CCNE1 P24864 1/20 0.38
CDK2 P24941 1/20 0.38
CCND3 P30281 1/20 0.38
CDK6 Q00534 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1088504 0.95 CXCR4 (0.56) CXCR4HRH4CCNKCDK12
SCHEMBL1089698 0.95 CXCR4 (0.56) CXCR4HRH4CCNKCDK12CCNE1
SCHEMBL1090306 0.90 CXCR4 (0.70) CXCR4HRH4CCNKCDK12HRH3
SCHEMBL1089415 0.90 CXCR4 (0.63) CXCR4HRH4CDK1CDK4CCNA2
SCHEMBL1090282 0.89 HRH4 (0.62) CXCR4HRH4HRH3CDK4CCND3
SCHEMBL1089717 0.87 CXCR4 (0.58) CXCR4HRH4CCNKCDK12HRH3
SCHEMBL1090136 0.87 CXCR4 (0.58) CXCR4HRH4CCNKCDK12HRH3
SCHEMBL1089732 0.87 CXCR4 (0.72) CXCR4HRH4HRH3
SCHEMBL1089392 0.86 CXCR4 (0.61) CXCR4HRH4CDK4CCNE1CDK2
SCHEMBL1090910 0.86 CXCR4 (0.61) CXCR4HRH4CDK4CCNE1CDK2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.