Predicted protein targets (top 17)
| gene | UniProt | supporting neighbours | confidence | |
|---|---|---|---|---|
| ▸ | HDAC4 | P56524 | 1/20 | 0.45 |
| ▸ | HDAC1 | Q13547 | 1/20 | 0.45 |
| ▸ | HDAC6 | Q9UBN7 | 1/20 | 0.45 |
| ▸ | CTSK | P43235 | 5/20 | 0.44 |
| ▸ | CTSS | P25774 | 4/20 | 0.44 |
| ▸ | EPHX1 | P07099 | 1/20 | 0.40 |
| ▸ | GAA | P10253 | 1/20 | 0.38 |
| ▸ | BTK | Q06187 | 1/20 | 0.36 |
| ▸ | PPARA | Q07869 | 3/20 | 0.35 |
| ▸ | PPARG | P37231 | 2/20 | 0.35 |
| ▸ | CACNA1B | Q00975 | 3/20 | 0.35 |
| ▸ | ITGB3 | P05106 | 2/20 | 0.35 |
| ▸ | ITGA2B | P08514 | 2/20 | 0.35 |
| ▸ | IDO1 | P14902 | 1/20 | 0.35 |
| ▸ | ACE | P12821 | 1/20 | 0.34 |
| ▸ | CTSL | P07711 | 1/20 | 0.34 |
| ▸ | CTSB | P07858 | 1/20 | 0.34 |
Click a target to see other patent compounds predicted against it — the reverse direction, in place.
Similar compounds — the chemically nearest patent molecules
Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.
| Compound | similarity | top predicted | shared targets | |
|---|---|---|---|---|
| SCHEMBL28019238 | 0.90 | HDAC4 (0.47) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL19064542 | 0.90 | HDAC4 (0.47) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL29392200 | 0.87 | HDAC4 (0.52) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL15156428 | 0.87 | CTSK (0.43) | CTSKCTSSPPARAPPARGITGB3 | |
| SCHEMBL13483252 | 0.87 | CTSK (0.43) | CTSKCTSSPPARAPPARGITGB3 | |
| SCHEMBL15157513 | 0.87 | CTSK (0.43) | CTSKCTSSPPARAPPARGITGB3 | |
| SCHEMBL29398036 | 0.82 | HDAC4 (0.51) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL11096628 | 0.82 | HDAC4 (0.51) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL29400626 | 0.82 | HDAC4 (0.51) | HDAC4HDAC1HDAC6CTSKCTSS | |
| SCHEMBL29401603 | 0.82 | HDAC4 (0.51) | HDAC4HDAC1HDAC6CTSKCTSS |
Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.
Patent provenance — the patents this molecule appears in, and who filed them
Claimed or disclosed in 16 patents. claimed = in the patent's claims; disclosed = body only.
| Patent | Title | Assignee | Published | Priority | Filing | Country | Status |
|---|---|---|---|---|---|---|---|
| US-20260116914-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | NAUTILUS SUBSIDIARY INC (US) | 2026-04-30 | — | — | US | disclosed |
| US-20250349136-A1 | METHODS AND SYSTEMS FOR COMPUTATIONAL DECODING OF BIOLOGICAL, CHEMICAL, AND PHYSICAL ENTITIES | NAUTILUS SUBSIDIARY INC (US) | 2025-11-13 | — | — | US | disclosed |
| US-12394223-B2 | Methods and systems for computational decoding of biological, chemical, and physical entities | NAUTILUS SUBSIDIARY, INC. (US) | 2025-08-19 | — | — | US | disclosed |
| US-12306093-B2 | Methods and systems for integrated on-chip single-molecule detection | NAUTILUS SUBSIDIARY, INC. (US) | 2025-05-20 | — | — | US | disclosed |
| US-20240249539-A1 | METHODS AND SYSTEMS FOR COMPUTATIONAL DECODING OF BIOLOGICAL, CHEMICAL, AND PHYSICAL ENTITIES | NAUTILUS SUBSIDIARY, INC. | 2024-07-25 | — | — | US | disclosed |
| US-11935311-B2 | Methods and systems for computational decoding of biological, chemical, and physical entities | NAUTILUS SUBSIDIARY, INC. (US) | 2024-03-19 | — | — | US | disclosed |
| US-20230340014-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | NAUTILUS SUBSIDIARY, INC. | 2023-10-26 | — | — | US | disclosed |
| EP-4231174-A2 | METHODS AND SYSTEMS FOR COMPUTATIONAL DECODING OF BIOLOGICAL, CHEMICAL, AND PHYSICAL ENTITIES | Nautilus Subsidiary, Inc. (US) | 2023-08-23 | — | — | EP | disclosed |
| US-20230257416-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | NAUTILUS SUBSIDIARY, INC. | 2023-08-17 | — | — | US | disclosed |
| US-20230221243-A1 | METHODS AND SYSTEMS FOR INTEGRATED ON-CHIP SINGLE-MOLECULE DETECTION | NAUTILUS SUBSIDIARY, INC. | 2023-07-13 | — | — | US | disclosed |
| US-20230213438-A1 | METHODS AND SYSTEMS FOR INTEGRATED ON-CHIP SINGLE-MOLECULE DETECTION | NAUTILUS SUBSIDIARY, INC. | 2023-07-06 | — | — | US | disclosed |
| EP-4165549-A1 | METHODS AND SYSTEMS FOR COMPUTATIONAL DECODING OF BIOLOGICAL, CHEMICAL, AND PHYSICAL ENTITIES | Nautilus Biotechnology, Inc. (US) | 2023-04-19 | — | — | EP | disclosed |
| US-11603383-B2 | Methods of generating nanoarrays and microarrays | NAUTILUS BIOTECHNOLOGY, INC. (US) | 2023-03-14 | — | — | US | disclosed |
| US-20220204549-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | NAUTILUS BIOTECHNOLOGY, INC. | 2022-06-30 | — | — | US | disclosed |
| EP-3963091-A1 | METHODS AND SYSTEMS FOR INTEGRATED ON-CHIP SINGLE-MOLECULE DETECTION | Nautilus Biotechnology, Inc. (US) | 2022-03-09 | — | — | EP | disclosed |
| US-20220050049-A1 | METHODS AND SYSTEMS FOR INTEGRATED ON-CHIP SINGLE-MOLECULE DETECTION | NAUTILUS SUBSIDIARY, INC. | 2022-02-17 | — | — | US | disclosed |
Patent text — is the patent's own abstract consistent with the prediction?
For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.
| Patent | Title | Text reads most about | Predicted target · text-rank |
|---|---|---|---|
| US-20260116914-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | SPPL2B, SNAP29, SPPL2A | HDAC4 4078/4885HDAC1 4630/4885HDAC6 3818/4885 |
| US-11603383-B2 | Methods of generating nanoarrays and microarrays | NAPA, SSBP1, NASP | HDAC4 3370/4885HDAC1 3396/4885HDAC6 1925/4885 |
| US-20220204549-A1 | METHODS OF GENERATING NANOARRAYS AND MICROARRAYS | NAPA, SSBP1, NASP | HDAC4 3370/4885HDAC1 3396/4885HDAC6 1925/4885 |
“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.