Padnarsertib

Padnarsertib

SCHEMBL29649112

Nc1ccc(/C=C/C(=O)NCc2cc3cc(-c4ccc(C(=O)N5CCC(F)(F)CC5)cc4)cc(-c4ccc(F)cc4)c3o2)cn1

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ PAK4 O96013 2/20 1.00
▸ NAMPT P43490 2/20 1.00
▸ PAK1 Q13153 1/20 1.00
▸ HPGD P15428 2/20 0.36
▸ MEN1 O00255 1/20 0.36
▸ LMNA P02545 1/20 0.36
▸ POLB P06746 1/20 0.36
▸ KMT2A Q03164 1/20 0.36
▸ SMN1; SMN2 Q16637 1/20 0.36
▸ L3MBTL1 Q9Y468 1/20 0.36
▸ GSK3B P49841 1/20 0.34
▸ HDAC3 O15379 3/20 0.34
▸ HDAC1 Q13547 3/20 0.34
▸ GPR183 P32249 1/20 0.34
▸ MTOR P42345 3/20 0.33
▸ PIK3CA P42336 2/20 0.33
▸ KCNH2 Q12809 3/20 0.33
▸ ABL1 P00519 2/20 0.33
▸ BCR P11274 2/20 0.33
▸ LIPC P11150 1/20 0.32

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Padnarsertib SCHEMBL29649080 1.00 PAK4 (1.00) PAK4NAMPTPAK1HPGDMEN1
Padnarsertib SCHEMBL16348032 1.00 PAK4 (1.00) PAK4NAMPTPAK1HPGDMEN1
Padnarsertib SCHEMBL16345416 1.00 PAK4 (1.00) PAK4NAMPTPAK1HPGDMEN1
SCHEMBL18317344 0.95 PAK4 (0.91) PAK4NAMPTPAK1HPGDMEN1
SCHEMBL16345152 0.95 PAK4 (0.91) PAK4NAMPTPAK1HPGDMEN1
SCHEMBL18317336 0.94 PAK4 (0.89) PAK4NAMPTPAK1HPGDHDAC3
SCHEMBL16347424 0.94 NAMPT (0.89) PAK4NAMPTPAK1GSK3BMTOR
SCHEMBL18317518 0.94 PAK4 (0.89) PAK4NAMPTPAK1SMN1; SMN2GPR183
SCHEMBL16345295 0.94 NAMPT (0.89) PAK4NAMPTPAK1GSK3BMTOR
SCHEMBL31622616 0.94 NAMPT (0.89) PAK4NAMPTPAK1GSK3BMTOR

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20260085064-A1 SUBSTITUTED BENZOFURANYL AND BENZOXAZOLYL COMPOUNDS AND USES THEREOF KARYOPHARM THERAPEUTICS INC (US) 2026-03-26 — — US disclosed
US-20260069581-A1 METHODS AND COMPOSITIONS FOR CANCER THERAPY OHIO STATE INNOVATION FOUNDATION (US) 2026-03-12 — — US disclosed
US-12331040-B2 Substituted benzofuranyl and benzoxazolyl compounds and uses thereof Karyopharm Therapeutics Inc. (US) 2025-06-17 — — US disclosed
WO-2024120442-A1 PAK4 PROTEIN DEGRADERS, PHARMACEUTICAL COMPOSITIONS, AND THERAPEUTIC APPLICATIONS CONVERGEN (SUZHOU) PHARMACEUTICAL CO., LTD. (CN) 2024-06-13 — — WO disclosed
WO-2022104108-A1 METHODS AND COMPOSITIONS FOR CANCER THERAPY OHIO STATE INNOVATION FOUNDATION (US) 2022-05-19 — — WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-12331040-B2 Substituted benzofuranyl and benzoxazolyl compounds and uses thereof BCL6, MALT1, BTK PAK4 2260/4885NAMPT 1782/4885PAK1 3233/4885
US-20260069581-A1 METHODS AND COMPOSITIONS FOR CANCER THERAPY HDAC8, HDAC3, SIRT1 PAK4 1374/4885NAMPT 12/4885PAK1 1070/4885
US-20260085064-A1 SUBSTITUTED BENZOFURANYL AND BENZOXAZOLYL COMPOUNDS AND USES THEREOF BCL6, MALT1, BCL6B PAK4 4159/4885NAMPT 4695/4885PAK1 4775/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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