SCHEMBL3538439

SCHEMBL3538439

CN1CCCC(Oc2ccc3nc(-c4n[nH]c5cc6c(cc45)OCO6)[nH]c3c2)C1

nearest known ligand 0.55

Predicted protein targets (top 14)

geneUniProtsupporting neighboursconfidence
CLK2 P49760 1/20 0.55
CLK3 P49761 1/20 0.55
DYRK1A Q13627 1/20 0.55
CHEK2 O96017 2/20 0.44
ABL1 P00519 6/20 0.44
FGFR1 P11362 11/20 0.43
FLT1 P17948 6/20 0.43
KDR P35968 3/20 0.43
BRD4 O60885 1/20 0.41
CHEK1 O14757 1/20 0.40
PDGFRA P16234 1/20 0.39
FGFR2 P21802 1/20 0.39
FGFR4 P22455 1/20 0.39
FGFR3 P22607 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3535347 0.85 CLK2 (0.61) CLK2CLK3DYRK1ACHEK2ABL1
SCHEMBL3538630 0.84 FGFR1 (0.55) CLK2CLK3DYRK1ACHEK2ABL1
SCHEMBL3534764 0.84 CLK2 (0.54) CLK2CLK3DYRK1ACHEK2ABL1
SCHEMBL3540107 0.80 FGFR1 (0.62) CLK2CLK3DYRK1AABL1FGFR1
SCHEMBL3536317 0.79 FGFR1 (0.63) CLK2CLK3DYRK1ACHEK2ABL1
SCHEMBL3538634 0.77 FGFR1 (0.49) CLK2CLK3DYRK1ACHEK2ABL1
SCHEMBL3535537 0.77 ABL1 (0.77) ABL1FGFR1FLT1KDR
SCHEMBL3534478 0.75 CLK2 (0.48) CLK2CLK3DYRK1AABL1FGFR1
SCHEMBL3532905 0.74 FGFR1 (0.58) CLK2CLK3DYRK1AABL1FGFR1
SCHEMBL3532735 0.73 FGFR1 (0.51) ABL1FGFR1FLT1KDR

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-7064215-B2 Indazole benzimidazole compounds CHIRON CORPORATION (US) 2006-06-20 US disclosed
US-20060079564-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2006-04-13 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060079564-A1 Indazole benzimidazole compounds ABL1, ABL2, ALK CLK2 506/4885CLK3 877/4885DYRK1A 1008/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.