SCHEMBL3538634

SCHEMBL3538634

CN1CCCC(Oc2ccc3[nH]c(-c4n[nH]c5cc(F)ccc45)nc3c2)C1

nearest known ligand 0.49

Predicted protein targets (top 19)

geneUniProtsupporting neighboursconfidence
FGFR1 P11362 9/20 0.49
FLT1 P17948 6/20 0.49
KDR P35968 3/20 0.49
CLK2 P49760 1/20 0.48
CLK3 P49761 1/20 0.48
DYRK1A Q13627 1/20 0.48
HTR2A P28223 1/20 0.44
ITK Q08881 2/20 0.43
CDK2 P24941 2/20 0.42
PRKCZ Q05513 1/20 0.42
PARP1 P09874 1/20 0.41
PDGFRB P09619 1/20 0.40
ABL1 P00519 3/20 0.40
CHEK2 O96017 1/20 0.40
CHEK1 O14757 1/20 0.39
CDK4 P11802 1/20 0.38
CCNA2 P20248 1/20 0.38
CCND1 P24385 1/20 0.38
CCND3 P30281 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3538630 0.93 FGFR1 (0.55) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3534764 0.82 CLK2 (0.54) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3535347 0.79 CLK2 (0.61) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3538439 0.77 CLK2 (0.55) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3540107 0.77 FGFR1 (0.62) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3534282 0.75 FGFR1 (0.54) FGFR1FLT1KDRHTR2ACDK2
SCHEMBL3536317 0.74 FGFR1 (0.63) FGFR1FLT1KDRCLK2CLK3
SCHEMBL3532746 0.73 FGFR1 (0.72) FGFR1FLT1KDRCDK2PRKCZ
SCHEMBL3535537 0.73 ABL1 (0.77) FGFR1FLT1KDRABL1
SCHEMBL3532905 0.72 FGFR1 (0.58) FGFR1FLT1KDRCLK2CLK3

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7642278-B2 Nitrogen compounds such as 3-(5-morpholin-4-yl-1H-benz-imidazol-2-yl)-1H-indazole and/or isomers, used as immunology modulators, antidiabetic agents, antiogenesis inhibitors or for prophylaxis of Alzheimer's disease NOVARTIS VACCINES AND DIAGNOSTICS, INC. (US) 2010-01-05 US disclosed
US-7064215-B2 Indazole benzimidazole compounds CHIRON CORPORATION (US) 2006-06-20 US disclosed
US-20060079564-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2006-04-13 US disclosed
EP-1401831-A1 INDAZOLE BENZIMIDAZOLE COMPOUNDS AS TYROSINE AND SERINE/THREONINE KINASE INHIBITORS CHIRON CORPORATION (US) 2004-03-31 EP disclosed
US-20030207883-A1 Indazole benzimidazole compounds CHIRON CORPORATION 2003-11-06 US disclosed
WO-2003004488-A1 INDAZOLE BENZIMIDAZOLE COMPOUNDS AS TYROSINE AND SERINE/THREONINE KINASE INHIBITORS CHIRON CORPORATION (US) 2003-01-16 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060079564-A1 Indazole benzimidazole compounds ABL1, ABL2, ALK FGFR1 886/4885FLT1 2793/4885KDR 2852/4885
US-20030207883-A1 Indazole benzimidazole compounds SLCO1B3, SLCO1B1, SLCO4C1 FGFR1 2175/4885FLT1 3562/4885KDR 4021/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.