SCHEMBL3597445

SCHEMBL3597445

COc1cccc(-c2cccc3ccn(CC(=O)NCCNCC4CCCCC4)c23)c1

nearest known ligand 0.45

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
KDM4E B2RXH2 1/20 0.45
CYP3A4 P08684 1/20 0.45
CYP2C9 P11712 1/20 0.45
POLB P06746 3/20 0.43
LMNA P02545 1/20 0.41
WNK1 Q9H4A3 1/20 0.41
MTNR1A P48039 1/20 0.40
MTNR1B P49286 1/20 0.40
HTT P42858 2/20 0.40
ALDH1A1 P00352 2/20 0.40
KMT2A Q03164 3/20 0.40
SMN1; SMN2 Q16637 3/20 0.40
MEN1 O00255 2/20 0.40
FAAH O00519 1/20 0.40
NPC1 O15118 2/20 0.38
RAB9A P51151 2/20 0.38
TP53 P04637 1/20 0.38
HSD17B10 Q99714 1/20 0.38
GAA P10253 1/20 0.38
CYP2C19 P33261 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3605921 0.91 EPHX2 (0.41) KDM4ECYP3A4CYP2C9POLBHTT
SCHEMBL3597289 0.87 ALDH1A1 (0.41) KDM4ELMNAHTTALDH1A1KMT2A
SCHEMBL3605994 0.87 PIM1 (0.42) KDM4EHTTALDH1A1KMT2AMEN1
SCHEMBL3592474 0.85 KDM4E (0.46) KDM4ECYP3A4CYP2C9POLBLMNA
SCHEMBL3594707 0.85 NPC1 (0.41) KDM4ELMNAHTTALDH1A1KMT2A
SCHEMBL3597443 0.85 KDM4E (0.42) KDM4ECYP3A4CYP2C9POLBLMNA
SCHEMBL3595323 0.84 ALDH1A1 (0.44) KDM4EPOLBHTTALDH1A1KMT2A
SCHEMBL3589635 0.84 NPY5R (0.41) KDM4EHTTALDH1A1KMT2ASMN1; SMN2
SCHEMBL3598036 0.84 HPGD (0.47) KDM4ECYP3A4CYP2C9POLBLMNA
SCHEMBL3592317 0.83 KDM4E (0.41) KDM4ELMNAHTTALDH1A1RAB9A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7807704-B2 Bicyclic, nitrogen-containing compounds modulating CXCR4 and/or CCXCKR2 CHEMOCENTRYX, INC. (US) 2010-10-05 US disclosed
US-20070275965-A1 CXCR4 modulators CHEMOCENTRYX, INC. (US) 2007-11-29 US disclosed
WO-2007115231-A2 CXCR4 MODULATORS CHEMOCENTRYX, INC. (US) 2007-10-11 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070275965-A1 CXCR4 modulators CXCL12, CXCR4, CXCR1 KDM4E 4801/4885CYP3A4 4506/4885CYP2C9 4317/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.