SCHEMBL3897306

SCHEMBL3897306

CN(CCc1ccccn1)Cc1cccc(C#CCCN2CCCCC2)c1

nearest known ligand 0.58

Predicted protein targets (top 13)

geneUniProtsupporting neighboursconfidence
HRH3 Q9Y5N1 11/20 0.58
CYP2D6 P10635 1/20 0.53
CYP2C9 P11712 1/20 0.53
CYP2C19 P33261 1/20 0.53
RECQL P46063 1/20 0.53
ATM Q13315 1/20 0.47
KDM4E B2RXH2 3/20 0.46
TSHR P16473 2/20 0.46
NPSR1 Q6W5P4 1/20 0.46
POLB P06746 1/20 0.46
TDP1 Q9NUW8 1/20 0.46
SIGMAR1 Q99720 2/20 0.44
ALDH1A1 P00352 1/20 0.44

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL13959158 0.84 CYP2D6 (0.62) HRH3CYP2D6CYP2C9CYP2C19RECQL
SCHEMBL3900324 0.79 HRH3 (0.58) HRH3CYP2D6CYP2C9KDM4ESIGMAR1
SCHEMBL3900751 0.78 HRH3 (0.54) HRH3KDM4ESIGMAR1
SCHEMBL3577427 0.75 HRH3 (0.61) HRH3KDM4ETSHRNPSR1POLB
SCHEMBL3905920 0.74 HRH3 (1.00) HRH3
SCHEMBL3897106 0.72 HRH3 (1.00) HRH3
SCHEMBL3901865 0.72 HRH3 (1.00) HRH3
SCHEMBL3896019 0.72 HRH3 (1.00) HRH3
SCHEMBL3900704 0.71 HRH3 (0.97) HRH3
SCHEMBL3901617 0.71 HRH3 (0.76) HRH3KDM4EALDH1A1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 24 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-1451167-B1 PHENYLALKYNES ORTHO MCNEIL PHARM INC (US) 2006-03-08 EP claimed
EP-1451167-A1 PHENYLALKYNES Ortho-McNeil Pharmaceutical, Inc. (US) 2004-09-01 EP claimed
US-20030144323-A1 For treatment of disorders and conditions mediated by the histamine receptor; allergies, sleep disorders, dementia ORTHO-MCNEIL PHARMACEUTICAL, INC. 2003-07-31 US claimed
WO-2003050099-A1 PHENYLALKYNES ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2003-06-19 WO claimed
US-7482364-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2009-01-27 US disclosed
US-7482364-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2009-01-27 US disclosed
US-7446104-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2008-11-04 US disclosed
US-7446104-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2008-11-04 US disclosed
US-20080103135-A1 PHENYLALKYNES APODACA RICHARD 2008-05-01 US disclosed
US-20080103135-A1 PHENYLALKYNES APODACA RICHARD 2008-05-01 US disclosed
US-20080096876-A1 PHENYLALKYNES APODACA RICHARD 2008-04-24 US disclosed
US-7288540-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2007-10-30 US disclosed
EP-1451167-B1 PHENYLALKYNES ORTHO MCNEIL PHARM INC (US) 2006-03-08 EP disclosed
EP-1567494-A1 METHODS FOR PREPARING PHENYLALKYNE DERIVATIVES Ortho-McNeil Pharmaceutical, Inc. (US) 2005-08-31 EP disclosed
US-6884803-B2 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2005-04-26 US disclosed
EP-1451167-A1 PHENYLALKYNES Ortho-McNeil Pharmaceutical, Inc. (US) 2004-09-01 EP disclosed
WO-2004050623-A1 METHODS FOR PREPARING PHENYLALKYNE DERIVATIVES ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2004-06-17 WO disclosed
US-20040002604-A1 Phenylalkynes ORTHO-MCNEIL PHARMACEUTICAL, INC. 2004-01-01 US disclosed
US-20030144323-A1 For treatment of disorders and conditions mediated by the histamine receptor; allergies, sleep disorders, dementia ORTHO-MCNEIL PHARMACEUTICAL, INC. 2003-07-31 US disclosed
WO-2003050099-A1 PHENYLALKYNES ORTHO-MCNEIL PHARMACEUTICAL, INC. (US) 2003-06-19 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (4 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080103135-A1 PHENYLALKYNES HRH2, HRH3, HNMT HRH3 2/4885CYP2D6 344/4885CYP2C9 942/4885
US-20080096876-A1 PHENYLALKYNES HRH2, HRH3, HNMT HRH3 2/4885CYP2D6 344/4885CYP2C9 942/4885
US-20030144323-A1 For treatment of disorders and conditions mediated by the histamine receptor; allergies, sleep disorders, dementia HRH3, HRH2, HRH4 HRH3 1/4885CYP2D6 494/4885CYP2C9 1178/4885
US-20040002604-A1 Phenylalkynes HRH2, HRH3, HNMT HRH3 2/4885CYP2D6 344/4885CYP2C9 942/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.