Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL4265277

NCCc1ccc(NCCCn2nc3c(c2C(=O)O)CCc2cnccc2-3)cc1.O=C(O)C(F)(F)F

nearest known ligand 0.36

Full drug profile on Sugi Atlas →

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
CDK2 P24941 6/20 0.36
PDPK1 O15530 1/20 0.36
KDM4C Q9H3R0 2/20 0.32
AURKA O14965 5/20 0.31
CCNA2 P20248 5/20 0.31
CCNA1 P78396 5/20 0.31
PLK1 P53350 3/20 0.31
ROCK2 O75116 7/20 0.31
NAMPT P43490 1/20 0.31
PLK3 Q9H4B4 1/20 0.31
PLK2 Q9NYY3 1/20 0.31
CACNA1B Q00975 1/20 0.31
KDM6B O15054 1/20 0.30
SLC2A1 P11166 1/20 0.30
GRK2 P25098 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Trifluoroacetic Acid SCHEMBL1656626 0.92 CDK2 (0.34) CDK2PDPK1AURKACCNA2CCNA1
SCHEMBL4265279 0.88 CDK2 (0.33) CDK2PDPK1AURKACCNA2CCNA1
Trifluoroacetic Acid SCHEMBL4258276 0.87 ROCK2 (0.32) CDK2PDPK1AURKACCNA2CCNA1
Trifluoroacetic Acid SCHEMBL4270462 0.86 CDK2 (0.41) CDK2PDPK1KDM4CAURKACCNA2
Trifluoroacetic Acid SCHEMBL6793644 0.86 CDK2 (0.36) CDK2PDPK1AURKACCNA2CCNA1
SCHEMBL6793287 0.85 ROCK2 (0.36) CDK2PDPK1KDM4CAURKACCNA2
Trifluoroacetic Acid SCHEMBL4270585 0.85 CDK2 (0.33) CDK2PDPK1AURKACCNA2CCNA1
Trifluoroacetic Acid SCHEMBL4262255 0.85 ROCK2 (0.38) CDK2KDM4CAURKACCNA2CCNA1
Trifluoroacetic Acid SCHEMBL1656607 0.85 CDK2 (0.36) CDK2PDPK1KDM4CAURKACCNA2
Trifluoroacetic Acid SCHEMBL4263119 0.85 ROCK2 (0.39) CDK2PDPK1KDM4CAURKACCNA2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 10 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20040127492-A1 Cyclic pyrazoles for the inhibition of mitogen activated protein kinase-activated protein kinase-2 PHARMACIA CORPORATION 2004-07-01 US claimed
US-9023787-B2 MAPKAP kinase-2 as a specific target for blocking proliferation of P53-defective MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2015-05-05 US disclosed
US-20140037755-A1 Mapkap Kinase-2 as a Specific Target for Blocking Proliferation of P53-Defective Cells MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2014-02-06 US disclosed
US-8440610-B2 Mapkap kinase-2 as a specific target for blocking proliferation of P53-defective cells MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2013-05-14 US disclosed
US-20120252737-A1 Methods for Diagnosing and Treating Cancer MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2012-10-04 US disclosed
US-20090181468-A1 Methods and compositions for treating cellular proliferative diseases YAFFE MICHAEL B 2009-07-16 US disclosed
US-20090010927-A1 Mapkap kinase-2 as a specific target for blocking proliferation of P53-defective cells NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT 2009-01-08 US disclosed
EP-1824498-A2 METHODS AND COMPOSITIONS FOR TREATING CELLULAR PROLIFERATIVE DISEASES THE MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2007-08-29 EP disclosed
US-20060115453-A1 Methods and compositions for treating cellular proliferative diseases NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT 2006-06-01 US disclosed
WO-2006053315-A2 METHODS AND COMPOSITIONS FOR TREATING CELLULAR PROLIFERATIVE DISEASES MASSACHUSETTS INSTITUTE OF TECHNOLOGY (US) 2006-05-18 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (4 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060115453-A1 Methods and compositions for treating cellular proliferative diseases MKI67, TP53, CCNC CDK2 29/4885PDPK1 876/4885KDM4C 2176/4885
US-20140037755-A1 Mapkap Kinase-2 as a Specific Target for Blocking Proliferation of P53-Defective Cells MAPKAPK2, MAPKAP1, MAP3K2 CDK2 77/4885PDPK1 112/4885KDM4C 4200/4885
US-20040127492-A1 Cyclic pyrazoles for the inhibition of mitogen activated protein kinase-activated protein kinase-2 MKNK2, MAPKAPK2, MAP3K2 CDK2 29/4885PDPK1 87/4885KDM4C 3390/4885
US-20090010927-A1 Mapkap kinase-2 as a specific target for blocking proliferation of P53-defective cells MAPKAPK2, MAPKAP1, MAP3K2 CDK2 77/4885PDPK1 112/4885KDM4C 4200/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.