Benzimidazole

Benzimidazole

SCHEMBL4553022

C1CCNC1.c1ccc2[nH]cnc2c1

nearest known ligand 0.44

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Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
SMN1; SMN2 Q16637 3/20 0.40
PDPK1 O15530 1/20 0.40
CA12 O43570 1/20 0.40
PARP1 P09874 1/20 0.40
ALOX15 P16050 1/20 0.40
CA9 Q16790 1/20 0.40
TNKS2 Q9H2K2 1/20 0.40
PRKCI P41743 1/20 0.40
KDM4E B2RXH2 5/20 0.39
ALDH1A1 P00352 4/20 0.39
HPGD P15428 3/20 0.39
RAB9A P51151 2/20 0.39
QPCT Q16769 2/20 0.39
QPCTL Q9NXS2 2/20 0.39
HTT P42858 1/20 0.39
MAPT P10636 1/20 0.39
RAD52 P43351 1/20 0.39
NPC1 O15118 1/20 0.39
TP53 P04637 1/20 0.39
HTR3A P46098 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Benzimidazole SCHEMBL739311 0.98 SMN1; SMN2 (0.39) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL15711438 0.96 SMN1; SMN2 (0.42) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL7392775 0.92 SMN1; SMN2 (0.42) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL29079327 0.88 SMN1; SMN2 (0.45) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL27660736 0.88 SMN1; SMN2 (0.45) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL28555792 0.88 SMN1; SMN2 (0.45) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL4359682 0.88 SMN1; SMN2 (0.48) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL7214615 0.88 SMN1; SMN2 (0.48) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL28467045 0.86 SMN1; SMN2 (0.47) SMN1; SMN2PDPK1CA12PARP1ALOX15
Benzimidazole SCHEMBL461969 0.85 SMN1; SMN2 (0.50) SMN1; SMN2PDPK1CA12PARP1ALOX15

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 8 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
CN-113512203-B Preparation method of chiral photosensitive metal organic framework material 江苏师范大学 2022-07-29 CN disclosed
CN-113512203-A Preparation method of chiral photosensitive metal organic framework material 江苏师范大学 2021-10-19 CN disclosed
CN-105793258-B The crystalline salt form and its application of benzimidazole cycle compound 爱杜西亚药品有限公司 2018-12-28 CN disclosed
CN-106565644-A 3- alkyl-5-hydroxy-4-aryl furanone derivative and preparation method thereof 上海大学 2017-04-19 CN disclosed
EP-1597229-B1 PYRROLIDINE DERIVATIVES AS OXYTOCIN ANTAGONISTS MERCK SERONO SA (CH) 2009-11-18 EP disclosed
US-20070037806-A1 Such as (3EZ,5S)-5-(hydroxymethyl)-1-[(2'-methyl-1,1'-biphenyl-4-yl)carbonyl]pyrrolidin-3-one O-methyloxime which blocks oxytocin receptors; for prevention and/or treatment of preterm labor, premature birth or dysmenorrhea APPLIED RESEARCH SYSTEMS ARS HOLDING N.V. (NL) 2007-02-15 US disclosed
EP-1597229-A2 PYRROLIDINE DERIVATIVES AS OXYTOCIN ANTAGONISTS Applied Research Systems ARS Holding N.V. (AN) 2005-11-23 EP disclosed
WO-2004076407-A2 PYRROLIDINE DERIVATIVES AS OXYTOCIN ANTAGONISTS APPLIED RESEARCH SYSTEMS ARS HOLDING N.V. (NL) 2004-09-10 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070037806-A1 Such as (3EZ,5S)-5-(hydroxymethyl)-1-[(2'-methyl-1,1'-biphenyl-4-yl)carbonyl]pyrrolidin-3-one O-methyloxime which blocks oxytocin receptors; for prevention and/or treatment of preterm labor, premature birth or dysmenorrhea OXTR, PRLHR, OPRL1 SMN1; SMN2 1432/4885PDPK1 3053/4885CA12 3826/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.