SCHEMBL541530

SCHEMBL541530

O=C(c1cnc(NC23CC4CC(C2)CC(C(=O)O)(C4)C3)nc1C(F)(F)F)N1CCS(O)(O)CC1

nearest known ligand 0.34

Predicted protein targets (top 11)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 1/20 0.34
GSK3A P49840 1/20 0.33
GSK3B P49841 1/20 0.33
HDAC3 O15379 1/20 0.32
HDAC1 Q13547 1/20 0.32
HDAC2 Q92769 1/20 0.32
HDAC6 Q9UBN7 1/20 0.32
GAA P10253 1/20 0.32
SCD O00767 1/20 0.31
MAPK8 P45983 1/20 0.31
RBP4 P02753 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL541531 0.93 CXCR4 (0.34) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541614 0.92 CXCR4 (0.34) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541547 0.91 CXCR4 (0.36) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541918 0.90 GSK3A (0.43) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL6521503 0.89 HDAC3 (0.41) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541242 0.86 CXCR4 (0.38) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL15397177 0.85 CXCR4 (0.34) CXCR4HDAC3HDAC1HDAC2HDAC6
SCHEMBL541615 0.85 CXCR4 (0.34) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541548 0.84 CXCR4 (0.36) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541926 0.84 CXCR4 (0.37) CXCR4HDAC3HDAC1HDAC2HDAC6

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20130310373-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2013-11-21 US disclosed
US-8524727-B2 Pyrimidine compound ASTELLAS PHARMA INC. (JP) 2013-09-03 US disclosed
EP-2415765-A1 PYRIMIDINE COMPOUND Astellas Pharma Inc. (JP) 2012-02-08 EP disclosed
US-20110053912-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2011-03-03 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110053912-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 350/4885GSK3A 4502/4885GSK3B 4534/4885
US-20130310373-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 206/4885GSK3A 4281/4885GSK3B 4275/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.