SCHEMBL541614

SCHEMBL541614

NC(=O)C12CC3CC(CC(Nc4ncc(C(=O)N5CCS(O)(O)CC5)c(C(F)(F)F)n4)(C3)C1)C2

nearest known ligand 0.34

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 1/20 0.34
MAPK8 P45983 3/20 0.34
HSD11B1 P28845 7/20 0.33
GSK3A P49840 1/20 0.33
GSK3B P49841 1/20 0.33
HDAC3 O15379 1/20 0.31
HDAC1 Q13547 1/20 0.31
HDAC2 Q92769 1/20 0.31
HDAC6 Q9UBN7 1/20 0.31
CYP3A4 P08684 2/20 0.31
CYP2D6 P10635 2/20 0.31
CYP2C9 P11712 2/20 0.31
SCD O00767 1/20 0.31
MAPK9 P45984 2/20 0.30
HSD11B2 P80365 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL541615 0.93 CXCR4 (0.34) CXCR4MAPK8HSD11B1GSK3AGSK3B
SCHEMBL541530 0.92 CXCR4 (0.34) CXCR4MAPK8GSK3AGSK3BHDAC3
SCHEMBL541547 0.90 CXCR4 (0.36) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541918 0.89 GSK3A (0.43) CXCR4MAPK8GSK3AGSK3BHDAC3
SCHEMBL6521503 0.88 HDAC3 (0.41) CXCR4MAPK8GSK3AGSK3BHDAC3
SCHEMBL15397176 0.86 CXCR4 (0.34) CXCR4MAPK8HSD11B1HDAC3HDAC1
SCHEMBL541242 0.86 CXCR4 (0.38) CXCR4MAPK8GSK3AGSK3BHDAC3
SCHEMBL541531 0.85 CXCR4 (0.34) CXCR4MAPK8GSK3AGSK3BHDAC3
SCHEMBL541548 0.83 CXCR4 (0.36) CXCR4GSK3AGSK3BHDAC3HDAC1
SCHEMBL541926 0.83 CXCR4 (0.37) CXCR4MAPK8HDAC3HDAC1HDAC2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20130310373-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2013-11-21 US disclosed
US-8524727-B2 Pyrimidine compound ASTELLAS PHARMA INC. (JP) 2013-09-03 US disclosed
EP-2415765-A1 PYRIMIDINE COMPOUND Astellas Pharma Inc. (JP) 2012-02-08 EP disclosed
US-20110053912-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2011-03-03 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110053912-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 350/4885MAPK8 2238/4885HSD11B1 4508/4885
US-20130310373-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 206/4885MAPK8 2453/4885HSD11B1 4464/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.