SCHEMBL5547754

SCHEMBL5547754

CN1CCN(C(C(=O)Nc2ccc3ccccc3c2)c2ccc(C(=O)Nc3cc(-c4ccccc4)ccc3N)cc2)CC1

nearest known ligand 0.58

Predicted protein targets (top 6)

geneUniProtsupporting neighboursconfidence
ABCB1 P08183 5/20 0.58
HDAC2 Q92769 9/20 0.53
HDAC3 O15379 6/20 0.53
HDAC1 Q13547 8/20 0.52
POLB P06746 1/20 0.46
MAPK1 P28482 1/20 0.46

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL2686406 0.90 ABCB1 (0.61) ABCB1HDAC2HDAC3HDAC1
SCHEMBL2684552 0.89 HDAC1 (0.56) ABCB1HDAC2HDAC3HDAC1POLB
SCHEMBL2684600 0.89 HDAC2 (0.61) ABCB1HDAC2HDAC3HDAC1
SCHEMBL2685468 0.86 HDAC1 (0.51) HDAC2HDAC3HDAC1
SCHEMBL2687804 0.85 HDAC1 (0.50) HDAC2HDAC3HDAC1
SCHEMBL2686862 0.81 HDAC1 (0.58) ABCB1HDAC2HDAC3HDAC1POLB
SCHEMBL14775932 0.80 HDAC2 (0.46) ABCB1HDAC2HDAC3HDAC1
SCHEMBL2685916 0.80 HDAC2 (0.61) HDAC2HDAC3HDAC1
SCHEMBL2685834 0.79 ABCB1 (0.49) ABCB1HDAC2HDAC3HDAC1
SCHEMBL2685588 0.79 HDAC2 (0.61) HDAC2HDAC3HDAC1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-8168658-B2 Inhibitors of histone deacetylase MERCK SHARP & DOHME CORP. (US) 2012-05-01 US disclosed
US-8168658-B2 Inhibitors of histone deacetylase MERCK SHARP & DOHME CORP. (US) 2012-05-01 US disclosed
US-20090069250-A1 Inhibitors of Histone Deacetylase MERCK SHARP & DOHME LLC 2009-03-12 US disclosed
US-20090069250-A1 Inhibitors of Histone Deacetylase MERCK SHARP & DOHME LLC 2009-03-12 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20090069250-A1 Inhibitors of Histone Deacetylase HDAC1, HDAC5, HDAC6 ABCB1 3319/4885HDAC2 4/4885HDAC3 5/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.