SCHEMBL5658269

SCHEMBL5658269

O=C(O)C1CCN(CCc2ccc3nsnc3c2)CC1

nearest known ligand 0.46

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
S1PR1 P21453 2/20 0.46
S1PR3 Q99500 2/20 0.46
HTR2A P28223 4/20 0.46
KCNH2 Q12809 2/20 0.45
HTR2C P28335 3/20 0.44
HTR7 P34969 3/20 0.44
HTR6 P50406 3/20 0.44
KCNJ1 P48048 1/20 0.44
LTA4H P09960 2/20 0.44
TP53 P04637 1/20 0.43
SMN1; SMN2 Q16637 1/20 0.43
ALDH1A1 P00352 3/20 0.42
KDM4E B2RXH2 2/20 0.42
LMNA P02545 1/20 0.42
KMT2A Q03164 1/20 0.42
PPARG P37231 1/20 0.42
NCOA2 Q15596 1/20 0.42
NCOA1 Q15788 1/20 0.42
HRH3 Q9Y5N1 1/20 0.41
L3MBTL1 Q9Y468 1/20 0.41

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL5776348 0.82 KCNH2 (0.49) HTR2AKCNH2HTR2CKCNJ1ALDH1A1
SCHEMBL1519356 0.75 HTR2A (0.75) HTR2ALTA4HL3MBTL1
SCHEMBL4227924 0.74 HTR2A (0.74) HTR2AHTR2CHTR7HTR6KDM4E
SCHEMBL8491424 0.74 HTR2A (0.57) S1PR1S1PR3HTR2AHTR2CHTR7
SCHEMBL15566801 0.74 HTR2A (0.57) S1PR1S1PR3HTR2AHTR2CHTR7
SCHEMBL18117071 0.74 KCNH2 (0.59) S1PR1S1PR3HTR2AKCNH2HTR2C
Hydrochloric Acid SCHEMBL1405913 0.74 HTR2A (0.73) HTR2ALTA4H
SCHEMBL5656040 0.73 MEN1 (0.53) ALDH1A1KDM4EKMT2ACYP1A2HPGD
SCHEMBL5657151 0.73 SLC6A4 (0.50) HTR2AKCNH2LTA4HSMN1; SMN2ALDH1A1
SCHEMBL5258151 0.73 L3MBTL1 (0.48) KCNH2LTA4HSMN1; SMN2ALDH1A1KDM4E

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 8 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7186730-B2 Bicyclic nitrogen-containing heterocyclic derivatives for use as antibacterials SMITHKLINE BEECHAM P.L.C. (GB) 2007-03-06 US claimed
EP-1392686-B1 BICYCLIC NITROGEN-CONTAINING HETEROCYCLIC DERIVATIVES FOR USE AS ANTIBACTERIALS SMITHKLINE BEECHAM PLC (GB) 2006-10-18 EP claimed
US-20040198755-A1 Bicyclic nitrogen-containing heterocyclic derivatives for use as antibacterials SMITHKLINE BEECHAM P.L.C. (GB) 2004-10-07 US claimed
US-7186730-B2 Bicyclic nitrogen-containing heterocyclic derivatives for use as antibacterials SMITHKLINE BEECHAM P.L.C. (GB) 2007-03-06 US disclosed
EP-1392686-B1 BICYCLIC NITROGEN-CONTAINING HETEROCYCLIC DERIVATIVES FOR USE AS ANTIBACTERIALS SMITHKLINE BEECHAM PLC (GB) 2006-10-18 EP disclosed
US-20040198755-A1 Bicyclic nitrogen-containing heterocyclic derivatives for use as antibacterials SMITHKLINE BEECHAM P.L.C. (GB) 2004-10-07 US disclosed
EP-1392686-A1 BICYCLIC NITROGEN-CONTAINING HETEROCYCLIC DERIVATIVES FOR USE AS ANTIBACTERIALS SMITHKLINE BEECHAM PLC (GB) 2004-03-03 EP disclosed
WO-2002096907-A1 BICYCLIC NITROGEN-CONTAINING HETEROCYCLIC DERIVATIVES FOR USE AS ANTIBACTERIALS SMITHKLINE BEECHAM P.L.C. (GB) 2002-12-05 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040198755-A1 Bicyclic nitrogen-containing heterocyclic derivatives for use as antibacterials NRDC, NUCB2, ASNS S1PR1 3335/4885S1PR3 2906/4885HTR2A 3324/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.