Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL928515

CS(=O)(=O)OC[C@H]1CN(C(=O)OCc2ccccc2)C[C@H]1N.O=C(O)C(F)(F)F

nearest known ligand 0.43

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Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
SMN1; SMN2 Q16637 3/20 0.43
NPC1 O15118 2/20 0.43
RAB9A P51151 2/20 0.43
CYP2C19 P33261 1/20 0.42
PDK1 Q15118 1/20 0.41
PDK2 Q15119 1/20 0.41
PDK3 Q15120 1/20 0.41
PDK4 Q16654 1/20 0.41
JAK2 O60674 1/20 0.40
JAK1 P23458 1/20 0.40
RORC P51449 3/20 0.39
MEN1 O00255 1/20 0.39
KMT2A Q03164 1/20 0.39
NPSR1 Q6W5P4 1/20 0.39
F13A1 P00488 1/20 0.39
TGM2 P21980 1/20 0.39
TGM1 P22735 1/20 0.39
HTT P42858 1/20 0.39
PDE4B Q07343 2/20 0.39
HTR2C P28335 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Trifluoroacetic Acid SCHEMBL6322770 1.00 SMN1; SMN2 (0.43) SMN1; SMN2NPC1RAB9ACYP2C19PDK1
SCHEMBL653687 0.94 SMN1; SMN2 (0.48) SMN1; SMN2NPC1RAB9ACYP2C19JAK2
SCHEMBL501192 0.83 SMN1; SMN2 (0.47) SMN1; SMN2NPC1RAB9ACYP2C19JAK2
Trifluoroacetic Acid SCHEMBL2802490 0.80 DPP7 (0.32)
SCHEMBL501030 0.80 SMN1; SMN2 (0.44) SMN1; SMN2NPC1RAB9ACYP2C19JAK2
SCHEMBL30455747 0.80 SMN1; SMN2 (0.48) SMN1; SMN2NPC1RAB9ACYP2C19JAK2
SCHEMBL4096075 0.79 SMN1; SMN2 (0.50) SMN1; SMN2NPC1RAB9ACYP2C19JAK2
SCHEMBL15515692 0.79 SMN1; SMN2 (0.56) SMN1; SMN2NPC1RAB9ACYP2C19PDK1
SCHEMBL12683432 0.79 SMN1; SMN2 (0.56) SMN1; SMN2NPC1RAB9ACYP2C19PDK1
SCHEMBL376611 0.78 SMN1; SMN2 (0.54) SMN1; SMN2NPC1RAB9ACYP2C19PDK1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7951791-B2 e.g. 2,7-bis-[(3R)-1-azabicyclo[2.2.2]octan-3-yloxy]-fluoren-9-one; alpha 7 Nicotinic acetylcholine receptors ligands; cognitive disorder, neurodegeneration, and neurodevelopmental disorders ABBOTT LABORATORIES (US) 2011-05-31 US disclosed
EP-2316836-A1 Substituted diazabicycloalkane derivatives as ligands at alpha 7 nicotinic acetylcholine receptors Abbott Laboratories (US) 2011-05-04 EP disclosed
US-7872010-B2 Substituted diazabicycloalkane derivatives having affinity for nicotinic acetylcholine receptors ABBOTT LABORATORIES (US) 2011-01-18 US disclosed
US-7399765-B2 Substituted diazabicycloalkane derivatives ABBOTT LABORATORIES (US) 2008-07-15 US disclosed
US-20050101602-A1 For example, 3-(6-phenyl-pyridazin-3-yl)-3,8-diaza-bicyclo[3.2.1]octane; for treatment or prevention of conditions and disorders related to nAChR activity, and more particularly alpha 7 nAChR activity, such as attention deficit disorder, attention deficit hyperactivity disorder, Alzheimer's disease ABBVIE INC. 2005-05-12 US disclosed
US-20050065178-A1 Substituted diazabicycloakane derivatives ABBOTT LABORATORIES 2005-03-24 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20050065178-A1 Substituted diazabicycloakane derivatives CHRNA7, CHRNA1, CHRNA5 SMN1; SMN2 826/4885NPC1 1018/4885RAB9A 1315/4885
US-20050101602-A1 For example, 3-(6-phenyl-pyridazin-3-yl)-3,8-diaza-bicyclo[3.2.1]octane; for treatment or prevention of conditions and disorders related to nAChR activity, and more particularly alpha 7 nAChR activity, such as attention deficit disorder, attention deficit hyperactivity disorder, Alzheimer's disease CHRNA7, CHRNA2, CHRNA6 SMN1; SMN2 1186/4885NPC1 303/4885RAB9A 1951/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.