CDK9

Cyclin-dependent kinase 9 · P50750 · CDK9 on Sugi Atlas →

237,899 patent compounds predicted against CDK9, 135,371 high-confidence (nearest known ligand ≥ 0.5)

Top predicted compounds (top 20 by supporting neighbours, then confidence)

CompoundConfidenceSupporting neighbours
SCHEMBL268925 SCHEMBL268925 0.50 17/20
SCHEMBL269583 SCHEMBL269583 0.50 17/20
SCHEMBL102235 SCHEMBL102235 1.00 13/20
SCHEMBL102955 SCHEMBL102955 1.00 13/20
Bms-387032 Bms-387032 (SCHEMBL187401) 1.00 13/20
SCHEMBL102656 SCHEMBL102656 0.79 13/20
SCHEMBL102951 SCHEMBL102951 0.76 13/20
SCHEMBL102660 SCHEMBL102660 0.75 13/20
SCHEMBL102233 SCHEMBL102233 1.00 12/20
SCHEMBL103266 SCHEMBL103266 0.79 12/20
SCHEMBL102507 SCHEMBL102507 0.78 12/20
SCHEMBL102650 SCHEMBL102650 0.76 12/20
SCHEMBL21498 SCHEMBL21498 0.35 12/20
SCHEMBL103265 SCHEMBL103265 1.00 11/20
SCHEMBL102984 SCHEMBL102984 0.77 11/20
SCHEMBL102952 SCHEMBL102952 0.76 11/20
Alvocidib Alvocidib (SCHEMBL3651) 1.00 10/20
Alvocidib Alvocidib (SCHEMBL3652) 1.00 10/20
SCHEMBL102236 SCHEMBL102236 0.75 10/20
SCHEMBL102764 SCHEMBL102764 0.75 10/20

Clinical trials — most relevant to CDK9 by text similarity (a relevance ranking, not an exhaustive list)

TrialPhaseStatus
Clinical and Pharmacoeconomic Assessment of CDK4/6 Inhibitors for Treatment of Breast Cancer in Egypt PHASE4COMPLETED
A Phase 3 Study Comparing Dinaciclib Versus Ofatumumab in Patients With Refractory Chronic Lymphocytic Leukemia (P07714) PHASE3COMPLETED
A Study of Palbociclib (PD-0332991) + Letrozole vs. Letrozole For 1st Line Treatment Of Postmenopausal Women With ER+/HER2- Advanced Breast Cancer (PALOMA-2) PHASE3COMPLETED
Implementing Geriatric Assessment for Dose Optimization of Cyclin-dependent Kinase (CDK) 4/6-inhibitors in Older Breast Cancer Patients PHASE3RECRUITING
A Study of Tersolisib (LY4064809/STX-478) With Other Anti-Cancer Treatments in Participants With Advanced Breast Cancer With a Genetic Change (PIK3CA) PHASE3RECRUITING
Efficacy Study Of P276-00 In Subjects Of Malignant Melanoma Positive For Cyclin D1 Expression PHASE2COMPLETED
CDK 4/6 Inhibitor, Ribociclib, With Adjuvant Endocrine Therapy for ER-positive Breast Cancer PHASE2ACTIVE_NOT_RECRUITING
To Reverse ENDocrine Resistance Trial - PD 0332991 Monotherapy vs PD 0332991 in Combination With the Endocrine Therapy PHASE2COMPLETED
A Phase II Study of AT7519M, a CDK Inhibitor, in Patients With Relapsed and/or Refractory Chronic Lymphocytic Leukemia PHASE2COMPLETED
Palbociclib and Sasanlimab for the Treatment of Advanced Clear Cell Renal Cell Carcinoma (ccRCC) or Papillary Renal Cell Carcinoma (pRCC) PHASE1/PHASE2RECRUITING
Palbociclib With Everolimus + Exemestane In BC PHASE1/PHASE2COMPLETED
Study of SLS009 (Formerly GFH009) a Potent Highly Selective CDK9 Inhibitor in Patients With Hematologic Malignancies and High-Risk Newly Diagnosed AML PHASE1/PHASE2RECRUITING
Study of the CDK4/6 Inhibitor Abemaciclib in Solid Tumors Harboring Genetic Alterations in Genes Encoding D-Type Cyclins or Amplification of CDK4 or CDK6 PHASE2RECRUITING
Determinants of Resistance to Endocrine Therapy and a Cyclin-dependent Kinases 4 and 6 (CDK4/6) Inhibitor for HR+ MBC PHASE2ACTIVE_NOT_RECRUITING
A First-in-Human Study of CDK-002 (exoSTING) in Subjects With Advanced/Metastatic, Recurrent, Injectable Solid Tumors PHASE1/PHASE2COMPLETED
Evexomostat Plus PI3K or AKT Inhibitor and Fulvestrant in Patients With a PI3K Alteration and HR+/Her2- Breast Cancer PHASE1/PHASE2RECRUITING
A Study of Palbociclib in Combination With Bazedoxifene in Hormone Receptor Positive Breast Cancer PHASE1/PHASE2COMPLETED
BAY 1000394 for MCL-1-, MYC-, and CCNE1-Amplified Tumors PHASE2WITHDRAWN
TQB3616 Capsules Combined With Abiraterone Acetate Plus Prednisone in Metastatic Castration-Resistant Prostate Cancer PHASE2UNKNOWN
Cyclin Dependent Kinase (CDK)4/6 Inhibitor, PD0332991 in Advanced Non-small Cell Lung Cancer NSCLC. PHASE2COMPLETED
A Clinical Trial of TQB3909 Tablets in Patients With Breast Cancer PHASE1/PHASE2UNKNOWN
Dinaciclib, Bortezomib, and Dexamethasone in Treating Patients With Relapsed Multiple Myeloma PHASE1COMPLETED
A Study of PRT2527 in Participants With Advanced Solid Tumors PHASE1COMPLETED
TSL2109 Capsules in Advanced Solid Tumor Patients: Safety, Tolerability, PK and Preliminary Efficacy PHASE1RECRUITING
Study of AC699 in Patients With Estrogen Receptor Positive/Human Epidermal Growth Factor Receptor 2 Negative (ER+/HER2-) Locally Advanced or Metastatic Breast Cancer PHASE1ACTIVE_NOT_RECRUITING
Real-World Clinical Outcomes and Toxicity in Metastatic Breast Cancer Patients Treated With First or Second Line CDK 4/6 Inhibitors and Endocrine Therapy nanCOMPLETED
Study Of Real-World Evidence In Patients Treated With Palbociclib During a 2.5 Years Follow-Up Period nanUNKNOWN
The SONImage Study nanACTIVE_NOT_RECRUITING
EVERST- Everolimus After Alpelisib in Women With Hormone Receptor-positive (HR+) Metastatic Breast Cancer (MBC) nanRECRUITING
Advanced Breast Cancer Study of CDK4/6 Inhibitor Combined With Endocrine Therapy Endocrine Therapy in HR+/HER2- Advanced Breast Cancer nanUNKNOWN

Related proteins — ESM-2 sequence neighbours (a CDK9 binder may also engage these)

ProteinNameSimilarity
Q99J95 1.000 Q99J95 →
Q5EAB2 1.000 Q5EAB2 →
Q641Z4 0.999 Q641Z4 →
Q7ZX42 0.999 Q7ZX42 →
Q7SXE8 0.998 Q7SXE8 →
Q6GLD8 0.997 Q6GLD8 →
Q4V862 0.996 Q4V862 →
Q12126 0.993 Q12126 →
G5EFV5 0.993 G5EFV5 →
Q5ZKN1 0.992 Q5ZKN1 →
A8WIP6 0.992 A8WIP6 →
O13958 0.990 O13958 →
Q6CCB0 0.990 Q6CCB0 →
O44408 0.989 O44408 →
Q8SW92 0.989 Q8SW92 →
Q9C9U2 0.989 Q9C9U2 →
Q4WQR3 0.988 Q4WQR3 →
Q3TZA2 0.988 Q3TZA2 →
MAPK13 Mitogen-activated protein kinase 13 0.988 landscape →
Q03147 0.988 Q03147 →
O60145 0.987 O60145 →
G4N374 0.987 G4N374 →
Q8CEQ0 0.987 Q8CEQ0 →
B0Y4X4 0.987 B0Y4X4 →
A8XA58 0.987 A8XA58 →
Q9Z1B7 0.987 Q9Z1B7 →
P20911 0.987 P20911 →
A0A194WDG1 0.987 A0A194WDG1 →
P51952 0.986 P51952 →
Q9LMT0 0.986 Q9LMT0 →