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BARD1 p.Asp612Ter

c.1833dup · rs1553614963 · VCV530030

Pathogenic Single submitter
Classification
Pathogenic
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 2 submitters
Consequence
nonsense (stop-gain)
predicted LoF
gnomAD v4.1
Not reported
no gnomAD frequency available for this variant
Conditions
1
hereditary breast carcinoma

Computational evidence

Protein change
Missense predictors do not apply to this variant type; conservation carries the signal.
Consequencenonsense (stop-gain)predicted loss-of-function in a haploinsufficient gene (ClinGen)
NMDpredictedpremature termination codon in exon 9 of 11
Splicing
SpliceAI—not assessed · substitutions only
Constraint at this position
ConservationphyloP 4GERP 1.1, phastCons 0.97

Predicted loss-of-function is descriptive, not an applied PVS1 code.

Population frequency

dbSNP / gnomAD

No gnomAD frequency available for this variant. This is missing data, not an absence: the variant may or may not be present in gnomAD. Rarity (ACMG PM2) and BA1/BS1 cannot be assessed for it.

Variant & gene context

Gene
BARD1
Protein
p.Asp612Ter
Coding
c.1833dup
MANE Select
NM_000465
dbSNP
rs1553614963
Type
Duplication
Location
chr2:214745136 (GRCh38)
Gene constraint
LOEUF 1.087 · pLI <0.01 · ClinGen HI 3/3 (gnomAD)
Structure
AlphaFold pLDDT 64.82 · 11 PDB
Residue 612
the brct 1 domain; a β-strand
Full BARD1 gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Disease context

hereditary breast carcinoma — disease report on Sugi Atlas → Associated genes, phenotypes, clinical trials & treatments

For Hereditary breast cancer (Orphanet):

Inheritance
Autosomal dominant, Multigenic/multifactorial
Onset
Adult, Elderly

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/bard1-p-asp612ter (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown