Send feedback

CD36 p.Pro351fs

c.1047_1051dup · rs772709798 · VCV3036442

Pathogenic Single submitter
Classification
Pathogenic
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 2 submitters
Consequence
frameshift
predicted LoF
gnomAD v4.1
Rare
rare (popmax 0.117%, mid)

Computational evidence

Protein change
Missense predictors do not apply to this variant type; conservation carries the signal.
Consequenceframeshiftpredicted loss-of-function
NMDpredictedpremature termination codon in exon 11 of 15
Splicing
SpliceAI—not assessed · substitutions only
Constraint at this position
ConservationphyloP 6.6GERP 0.39, phastCons 1
Overall
CADD33.0PHRED · no single calibrated threshold — expert panels disagree

Predicted loss-of-function is descriptive, not an applied PVS1 code.

Population frequency

gnomAD v4.1 · exomes + genomes
Grpmax group 0.117% Middle Eastern · 7/5,974 alleles
Filtering AF 0.055% ClinGen BA1/BS1 input FAF95, joint · FAF99 0.0389%
Overall 0.00323% 52/1,610,510 alleles · rare
Ancestry group Frequency 1 in
Middle Easterngrpmax 0.117% 853
Remaining individualsnot grpmax-eligible 0.00802% 12,467
European (non-Finnish) 0.00331% 30,192
South Asian 0.0011% 90,980

Rarity supports pathogenicity (ACMG PM2); frequency above a disease-specific BA1/BS1 threshold argues against it. A variant frequent in one ancestry group can be near-absent in others, so a single global figure can mislead.

Variant & gene context

Gene
CD36
Protein
p.Pro351fs
Coding
c.1047_1051dup
MANE Select
NM_001001548
dbSNP
rs772709798
Type
Duplication
Location
chr7:80671960 (GRCh38)
Gene constraint
LOEUF 1.953 · pLI <0.01 · ClinGen HI gene assoc. with recessive phenotype (gnomAD)
Structure
AlphaFold pLDDT 94.14 · 1 PDB
Residue 351
an α-helix
Full CD36 gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Similar variants

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/cd36-p-pro351fs (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown