Send feedback

DUSP28 p.Val113Leu

c.337G>C · rs2536134938 · VCV3086307

Uncertain significance Single submitter
Classification
Uncertain significance
ClinVar
Review
Single submitter ★☆☆☆
ClinVar · 1 submitter
AlphaMissense
ambiguous
0.4548 · ACMG-weighted
gnomAD v4.1
Not reported
no allele count reported in gnomAD v4.1 (AN 1,537,250)

⚠ Built without this gene's context — gene constraint and dosage, protein structure, pathways, panels and related-variant links were not looked up for this page. why

Computational evidence

Protein change
AlphaMissense0.4548ambiguous
REVEL0.352indeterminate
SaProtLLR -8.49tolerated
Splicing
SpliceAI—not looked up on this page · why
Constraint at this position
ConservationphyloP 4.5GERP 1.3, phastCons 1
Regional constrainto/e 1.38unconstrained · MANE · 779 bp · p 4.4e-10 · regional, not allelic
Overall
CADD14.4PHRED · no single calibrated threshold — expert panels disagree

AlphaMissense carries the ACMG weight for missense; REVEL and SaProt are independent agreement signals.

Population frequency

gnomAD v4.1 · exomes + genomes

No allele count reported in gnomAD v4.1 (AN 1,537,250). This is missing data, not an absence: the variant may or may not be present in gnomAD. Rarity (ACMG PM2) and BA1/BS1 cannot be assessed for it.

Variant & gene context

Gene
DUSP28
Protein
p.Val113Leu
Coding
c.337G>C
MANE Select
NM_001370465
dbSNP
rs2536134938
Type
single nucleotide variant
Location
chr2:240561021 (GRCh38)
Full DUSP28 gene report on Sugi Atlas → Gene function, pathways, protein structure, interactions & more

Built on 18 open, versioned datasets — ClinVar, gnomAD, AlphaMissense, REVEL, ClinGen & more — plus Sugi Variant's own cross-source analysis. Source data 2026-01–2026-10, ClinVar 2026-10. Full sources & versions →

Cite Sugi Variant

Gür T. Sugi Variant: A Deterministic Per-Variant Germline Reference from a Knowledge Graph for Humans and AI Agents. 2026. doi:10.5281/zenodo.21509445. This variant: https://sugi.bio/variant/dusp28-p-val113leu (accessed [today's date]).

Preprint & method: sugi.bio/variant/method Machine-readable: this page as Markdown